Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("lme4")

1.1-35.5 by Ben Bolker, 5 months ago


https://github.com/lme4/lme4/


Report a bug at https://github.com/lme4/lme4/issues


Browse source code at https://github.com/cran/lme4


Authors: Douglas Bates [aut] , Martin Maechler [aut] , Ben Bolker [aut, cre] , Steven Walker [aut] , Rune Haubo Bojesen Christensen [ctb] , Henrik Singmann [ctb] , Bin Dai [ctb] , Fabian Scheipl [ctb] , Gabor Grothendieck [ctb] , Peter Green [ctb] , John Fox [ctb] , Alexander Bauer [ctb] , Pavel N. Krivitsky [ctb, cph] , shared copyright on simulate.formula) , Emi Tanaka [ctb] , Mikael Jagan [ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports graphics, grid, splines, utils, parallel, MASS, lattice, boot, nlme, minqa, nloptr

Depends on Matrix, methods, stats

Suggests knitr, rmarkdown, MEMSS, testthat, ggplot2, mlmRev, optimx, gamm4, pbkrtest, HSAUR3, numDeriv, car, dfoptim, mgcv, statmod, rr2, semEff, tibble, merDeriv

Linking to Rcpp, RcppEigen, Matrix


Imported by ARTool, AgroR, BCClong, BFpack, BayesCACE, BayesLN, BayesSenMC, BradleyTerry2, CIMPLE, CR2, CRTspat, CleaningValidation, CompositeReliability, DClusterm, DHARMa, EQUALSTATS, ESTER, EdSurvey, GLMMcosinor, GLMpack, HDANOVA, HeritSeq, IDmeasurer, IMTest, INLAjoint, INSPECTumours, JWileymisc, KenSyn, LEGIT, LKT, LSAmitR, LongDat, MAGNAMWAR, MCM, MDMR, MECfda, MF.beta4, MIGEE, MLID, MLMusingR, MMeM, MedianaDesigner, MethodCompare, MiRKAT, MixedPsy, MultiRR, PBImisc, PLmixed, PStrata, PSweight, PUMP, PheVis, Phenotype, PoolTestR, PrevMap, REndo, RLRsim, RRreg, RVAideMemoire, Rcmdr, RcmdrPlugin.TeachStat, SBMTrees, SIAmodules, ShinyItemAnalysis, SignacX, SimplyAgree, SlaPMEG, SoyNAM, SumcaVer1, Surrogate, TcGSA, VCA, VetResearchLMM, ZLAvian, abn, actuaRE, agriutilities, aihuman, altmeta, attrib, autoMrP, bayesammi, baystability, blmeco, boot.pval, breakaway, brokenstick, buildmer, car, chngpt, ciTools, cito, climwin, clinicalsignificance, clintools, clustTMB, compositeReliabilityInNestedDesigns, confintROB, conversim, cpr, crctStepdown, cv, cvms, dataquieR, daySupply, demic, designr, diagmeta, difR, dmlalg, doremi, eatRep, eefAnalytics, effects, epr, evolvability, ez, faraway, fastFMM, fence, finalfit, fishmethods, fullfact, galamm, gammi, geeasy, geex, glm.predict, glmm.hp, glmmEP, glmmSeq, glmmTMB, gorica, grafify, gvcR, ib, iccbeta, iccmult, inferference, intRvals, inti, isni, jlmerclusterperm, joineRML, jomo, jstable, konfound, lefko3, likelihoodR, longsurr, manymodelr, mbest, mecor, mediation, meta, metadeconfoundR, metamicrobiomeR, metamisc, metan, metaplus, micemd, misty, mixedbiastest, mlVAR, mlmhelpr, mlmpower, mlmtools, modnets, mult.latent.reg, multiDimBio, multiblock, multid, multilevelTools, multilevelmod, multisite.accuracy, multitool, multpois, mxnorm, netmediate, omics, pamm, partR2, pastaPlot, pcgen, pcvr, pdR, peramo, phoenics, phyr, piecewiseSEM, plgraphics, powerbydesign, pprof, projpred, psfmi, psycModel, ptmixed, pwlmm, pwr4exp, qape, qra, quest, rADA, raincin, refund, refund.shiny, reghelper, registr, regplot, repmod, reproducer, rewie, rockchalk, rosetta, rpql, rptR, rr2, rsq, rstanarm, rties, saeczi, samplr, sdmTMB, semEff, siland, skpr, smicd, spAbundance, spOccupancy, specr, splithalf, spsurvey, squid, stabiliser, stability, standardize, statgenGxE, statgenSTA, stevemisc, surrosurv, svylme, swCRTdesign, swaprinc, trouBBlme4SolveR, tukeytrend, unmarked, varTestnlme, vglmer, warpMix, weights, welchADF.

Depended on by BClustLonG, CLME, GLMMRR, LMERConvenienceFunctions, MEMSS, MargCond, MixRF, MultisiteMediation, SPCDAnalyze, WeMix, WebPower, afex, agRee, arm, bapred, blme, cAIC4, carcass, cgam, dfmeta, eirm, gamm4, glmertree, glmmPen, gtheory, influence.ME, jlctree, lme4breeding, lmerTest, longpower, macc, marked, merDeriv, merTools, mixAK, mlmRev, mlma, mvMISE, panelr, pbkrtest, pedigreemm, predictmeans, predint, r2mlm, robustBLME, robustlmm, sae, simr, structree, vcPB.

Suggested by AICcmodavg, ANOM, AgreementInterval, BGData, BayesFactor, DAAG, EgoCor, Epi, FRK, HLMdiag, HSAUR, HSAUR2, HSAUR3, HelpersMG, ICCbin, KFAS, LMMstar, MESS, MOCHA, MethComp, MuMIn, NHSRdatasets, OlinkAnalyze, OnAge, OpenMx, R2admb, RESI, RcmdrPlugin.NMBU, RoBMA, SARP.compo, SASmixed, ScottKnott, SimSurvey, TripleR, TukeyC, ZIBR, agridat, aod, aods3, autoReg, bartCause, bayestestR, brms, brolgar, broom, broom.helpers, broom.mixed, bruceR, cardx, catdata, catregs, clubSandwich, codebook, correlation, ctsem, datawizard, dlnm, doBy, dominanceanalysis, domir, dscore, ecostats, effectsize, embed, emmeans, epimdr, epimdr2, equatiomatic, eyetrackingR, finetune, flexmix, flextable, gamair, ggResidpanel, ggeffects, gglm, ggstatsplot, glmglrt, glmmML, glmulti, gmodels, gratia, gtsummary, hamlet, hmclearn, hnp, huxtable, injurytools, insight, interactions, ipmr, irtrees, jlme, jtools, kyotil, languageR, latrend, lava, lavaSearch2, likelihoodAsy, lmeInfo, lmeresampler, lmfor, longmixr, lucid, lvmisc, marginaleffects, margins, matrixset, metadat, metafor, metarep, mice, miceadds, mitml, mixlm, mlpwr, mlr3pipelines, mmrm, modelbased, modelfactory, modelsummary, multcomp, multilevelcoda, ordinal, pan, papaja, parameters, pda, performance, permutes, pez, phia, polypoly, postHoc, psych, purge, r2glmm, reformulas, report, rfars, rmcorr, samplingDataCRT, sandwich, scicomptools, see, sense, shinybrms, simglm, singcar, sjPlot, sjstats, sjtable2df, sleev, slim, spaMM, stan4bart, supernova, tableone, tidyLPA, tidyfit, tidystats, tram, tramME.

Enhanced by LAM, biometryassist, immer, memisc, papeR, prediction, stargazer, texreg.


See at CRAN