Reference manual

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install.packages("sdmTMB")

0.3.0 by Sean C. Anderson, 2 months ago


https://pbs-assess.github.io/sdmTMB/index.html, https://pbs-assess.github.io/sdmTMB/


Report a bug at https://github.com/pbs-assess/sdmTMB/issues


Browse source code at https://github.com/cran/sdmTMB


Authors: Sean C. Anderson [aut, cre] , Eric J. Ward [aut] , Lewis A. K. Barnett [aut] , Philina A. English [aut] , James T. Thorson [ctb, cph] , VAST author) , Joe Watson [ctb] (Censored Poisson) , Julia Indivero [ctb] (Vignette writing) , Cole C. Monnahan [ctb, cph] , VAST contributor) , Mollie Brooks [ctb, cph] , glmmTMB author) , Ben Bolker [ctb, cph] , glmmTMB author) , Kasper Kristensen [ctb, cph] (TMB/glmmTMB author) , Martin Maechler [ctb, cph] , glmmTMB author) , Arni Magnusson [ctb, cph] , glmmTMB author) , Hans J. Skaug [ctb, cph] (glmmTMB author , SPDE barrier) , Anders Nielsen [ctb, cph] , glmmTMB author) , Casper Berg [ctb, cph] , glmmTMB author) , Koen van Bentham [ctb, cph] (glmmTMB author) , Olav Nikolai Breivik [ctb, cph] (SPDE barrier) , Simon Wood [ctb, cph] (mgcv: smoother prediction) , Paul-Christian B├╝rkner [ctb, cph] (brms: smoother matrix parsing) , His Majesty the King in Right of Canada , as represented by the Minister of the Department of Fisheries and Oceans [cph]


Documentation:   PDF Manual  


GPL-3 license


Imports assertthat, clisymbols, cli, fishMod, generics, glmmTMB, graphics, lifecycle, Matrix, methods, mgcv, mvtnorm, nlme, rlang, stats, TMB

Suggests dplyr, effects, estimability, emmeans, future, future.apply, ggeffects, ggforce, ggplot2, INLA, knitr, lme4, rgdal, rmarkdown, sf, splancs, testthat, tibble, visreg

Linking to RcppEigen, TMB

System requirements: GNU make, C++17


See at CRAN