Statistical Analysis in Epidemiology

Functions for demographic and epidemiological analysis in the Lexis diagram, i.e. register and cohort follow-up data. In particular representation, manipulation, rate estimation and simulation for multistate data - the Lexis suite of functions, which includes interfaces to 'mstate', 'etm' and 'cmprsk' packages. Contains functions for Age-Period-Cohort and Lee-Carter modeling and a function for interval censored data. Has functions for extracting and manipulating parameter estimates and predicted values (ci.lin and its cousins), as well as a number of epidemiological data sets.


Reference manual

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install.packages("Epi")

2.66 by Bendix Carstensen, 3 months ago


http://bendixcarstensen.com/Epi/


Browse source code at https://github.com/cran/Epi


Authors: Bendix Carstensen [aut, cre] , Martyn Plummer [aut] , Esa Laara [ctb] , Michael Hills [ctb]


Documentation:   PDF Manual  


GPL-2 license


Imports cmprsk, etm, splines, MASS, survival, plyr, dplyr, Matrix, numDeriv, data.table, zoo, mgcv, magrittr

Depends on utils

Suggests mstate, nlme, lme4, demography, popEpi, tidyr


Imported by Greg, MCARtest, TwoTimeScales, climatehealth, codeCollection, flexrsurv, popEpi, pubh.

Depended on by bshazard, cohorttools, dani.

Suggested by biostat3, catregs, fmsb, mable, metafor, pander, shinyPredict.


See at CRAN