Most recently updated packages

drake — 7.2.0

A Pipeline Toolkit for Reproducible Computation at Scale

clickR — 0.4.32

Fix Data and Create Report Tables from Different Objects

gibble — 0.2.0

Geometry Decomposition

madness — 0.2.6

Automatic Differentiation of Multivariate Operations

ICAOD — 0.9.9

Optimal Designs for Nonlinear Models

MetaCycle — 1.2.0

Evaluate Periodicity in Large Scale Data

CrossVA — 0.9.6

Verbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms

caret — 6.0-83

Classification and Regression Training

POT — 1.1-7

Generalized Pareto Distribution and Peaks Over Threshold

StratigrapheR — 0.0.4

Integrated Stratigraphy

blockseg — 0.5.2

Two Dimensional Change-Points Detection

akmedoids — 0.1.1

Anchored Kmedoids for Longitudinal Data Clustering

GeneCycle — 1.1.3

Identification of Periodically Expressed Genes

GerminaR — 1.3

Germination Indices and Graphics for Seed Germination in Ecophysiological Studies

PHEindicatormethods — 1.1.1

Common Public Health Statistics and their Confidence Intervals

bzinb — 1.0.1

Bivariate Zero-Inflated Negative Binomial Model Estimator

plotGMM — 0.2.0

Tools for Visualizing Gaussian Mixture Models

textmineR — 3.0.4

Functions for Text Mining and Topic Modeling

xtensor — 0.11.0-0

Headers for the 'xtensor' Library

mlxR — 4.0.0

Simulation of Longitudinal Data

cba — 0.2-21

Clustering for Business Analytics

SDMTools — 1.1-221.1

Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises

PDFEstimator — 0.1-3

Nonparametric Probability Density Estimator

expperm — 1.1

Computing Expectations and Marginal Likelihoods for Permutations

MiDA — 0.1.2

Microarray Data Analysis

deisotoper — 0.0.7

Detection of Isotope Pattern of a Mass Spectrometric Measurement

UCSCXenaTools — 1.2.1

Download and Explore Datasets from UCSC Xena Data Hubs

pammtools — 0.1.11

Piece-Wise Exponential Additive Mixed Modeling Tools

Orcs — 1.2.0

Omnidirectional R Code Snippets

robustvarComp — 0.1-5

Robust Estimation of Variance Component Models

cOde — 1.0.0

Automated C Code Generation for 'deSolve', 'bvpSolve'

nasapower — 1.1.1

NASA POWER API Client

R.filesets — 2.13.0

Easy Handling of and Access to Files Organized in Structured Directories

clustree — 0.4.0

Visualise Clusterings at Different Resolutions

wfe — 1.9.1

Weighted Linear Fixed Effects Regression Models for Causal Inference

Haplin — 7.1.0

Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes

hypergate — 0.8.1

Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry

cAIC4 — 0.8

Conditional Akaike Information Criterion for 'lme4'

httk — 1.9.1

High-Throughput Toxicokinetics

taxotools — 0.0.23

Tools to Handle Taxonomic Lists

explor — 0.3.5

Interactive Interfaces for Results Exploration

gjam — 2.2.7

Generalized Joint Attribute Modeling

transport — 0.11-1

Computation of Optimal Transport Plans and Wasserstein Distances

gamCopula — 0.0-5

Generalized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas

nzilbb.labbcat — 0.2-0

Accessing Data Stored in 'LaBB-CAT' Instances

Map2NCBI — 1.2

Mapping Markers to the Nearest Genomic Feature

reactR — 0.4.0

React Helpers

geodist — 0.0.3

Fast, Dependency-Free Geodesic Distance Calculations

filehash — 2.4-2

Simple Key-Value Database

EpiILMCT — 1.1.3

Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics

eNetXplorer — 1.0.2

Quantitative Exploration of Elastic Net Families for Generalized Linear Models

gRc — 0.4-3.2

Inference in Graphical Gaussian Models with Edge and Vertex Symmetries

worldmet — 0.8.7

Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD)

swdft — 1.0.0

Sliding Window Discrete Fourier Transform (SWDFT)

SPUTNIK — 1.1.2

SPatially aUTomatic deNoising for Ims toolKit

discSurv — 1.4.0

Discrete Time Survival Analysis

statVisual — 1.0.9

Statistical Visualization Tools

pct — 0.1.2

Propensity to Cycle Tool

TCIApathfinder — 1.0.5

Client for the Cancer Imaging Archive REST API

geostatsp — 1.7.8

Geostatistical Modelling with Likelihood and Bayes

traitdataform — 0.5.3

Formatting and Harmonizing Ecological Trait-Data

BART — 2.4

Bayesian Additive Regression Trees

catnet — 1.15.5

Categorical Bayesian Network Inference

radtools — 1.0.5

Utilities for Convenient Extraction of Medical Image Metadata

tidytransit — 0.4.0

Read, Validate, Analyze, and Map Files in the General Transit Feed Specification

tuneRanger — 0.5

Tune Random Forest of the 'ranger' Package

survtmle — 1.1.1

Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings

BMSC — 0.2.0

Bayesian Model Selection under Constraints

PTXQC — 0.92.6

Quality Report Generation for MaxQuant Results

forecast — 8.6

Forecasting Functions for Time Series and Linear Models

BoolNet — 2.1.5

Construction, Simulation and Analysis of Boolean Networks

cdcsis — 2.0.1

Conditional Distance Correlation Based Feature Screening and Conditional Independence Inference

tsfeatures — 1.0.1

Time Series Feature Extraction

gllvm — 1.1.3

Generalized Linear Latent Variable Models

HDMT — 1.0

A Multiple Testing Procedure for High-Dimensional Mediation Hypotheses

BIFIEsurvey — 3.2-25

Tools for Survey Statistics in Educational Assessment

holodeck — 0.2.0

A Tidy Interface for Simulating Multivariate Data

mdmb — 1.3-18

Model Based Treatment of Missing Data

fastNaiveBayes — 1.1.2

Extremely Fast Implementation of a Naive Bayes Classifier

arulesSequences — 0.2-22

Mining Frequent Sequences

cmmr — 0.1.2

CEU Mass Mediator RESTful API

dstat — 1.0.4

Conditional Sensitivity Analysis for Matched Observational Studies

scatterD3 — 0.9

D3 JavaScript Scatterplot from R

fpeek — 0.1.1

Check Text Files Content at a Glance

frequentdirections — 0.1.0

Implementation of Frequent-Directions Algorithm for Efficient Matrix Sketching

RJDemetra — 0.1.2

Interface to 'JDemetra+' Seasonal Adjustment Software

labelled — 2.2.0

Manipulating Labelled Data

dbparser — 1.0.1

'DrugBank' Database XML Parser

Seurat — 3.0.0

Tools for Single Cell Genomics

Irescale — 0.2.6

Calculate and Scale Moran's I

PwrGSD — 2.3.1

Power in a Group Sequential Design

allelematch — 2.5.1

Identifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present

island — 0.2.4

Stochastic Island Biogeography Theory Made Easy

lpdensity — 0.2.3

Local Polynomial Density Estimation and Inference

Brq — 2.5

Bayesian Analysis of Quantile Regression Models

miceadds — 3.2-48

Some Additional Multiple Imputation Functions, Especially for 'mice'

glcm — 1.6.3

Calculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs)

projects — 1.1.1

A Project Infrastructure for Researchers

robCompositions — 2.1.0

Compositional Data Analysis

Ternary — 1.1.0

An R Package for Creating Ternary Plots