Reconstruction of Causal Networks for Data with Random Genetic Effects

Implements the pcgen algorithm, which is a modified version of the standard pc-algorithm, with specific conditional independence tests and modified orientation rules. pcgen extends the approach of Valente et al. (2010) with reconstruction of direct genetic effects.


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install.packages("pcgen")

0.2.0 by Pariya Behrouzi, 3 years ago


Browse source code at https://github.com/cran/pcgen


Authors: Willem Kruijer , Pariya Behrouzi , Maria Xose Rodriguez-Alvarez


Documentation:   PDF Manual  


GPL-3 license


Imports pcalg, graph, Matrix, stats, MASS, utils, Hmisc, methods, lme4, sommer, ggm


See at CRAN