Reconstruction of Causal Networks for Data with Random Genetic Effects

Implements the pcgen algorithm, which is a modified version of the standard pc-algorithm, with specific conditional independence tests and modified orientation rules. pcgen extends the approach of Valente et al. (2010) with reconstruction of direct genetic effects.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


0.2.0 by Pariya Behrouzi, 3 years ago

Browse source code at

Authors: Willem Kruijer , Pariya Behrouzi , Maria Xose Rodriguez-Alvarez

Documentation:   PDF Manual  

GPL-3 license

Imports pcalg, graph, Matrix, stats, MASS, utils, Hmisc, methods, lme4, sommer, ggm

See at CRAN