Reference manual

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install.packages("coda")

0.19-4.1 by Martyn Plummer, 2 months ago


Browse source code at https://github.com/cran/coda


Authors: Martyn Plummer [aut, cre, trl] , Nicky Best [aut] , Kate Cowles [aut] , Karen Vines [aut] , Deepayan Sarkar [aut] , Douglas Bates [aut] , Russell Almond [aut] , Arni Magnusson [aut]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports lattice


Imported by AHMbook, BAMBI, BANOVA, BCClong, BCHM, BDWreg, BGVAR, BNPdensity, BNPmix, BNSP, BRugs, BSL, BTSPAS, BTYDplus, BayesBEKK, BayesBinMix, BayesCACE, BayesComm, BayesDissolution, BayesFM, BayesGWQS, BayesLN, BayesMFSurv, BayesMassBal, BayesOrdDesign, BayesPostEst, BayesRS, BayesTools, BayesX, BayesianFactorZoo, BayesianTools, Bayesrel, Bchron, Bergm, BiDAG, BiostatsUHNplus, CARBayes, CARBayesST, CARlasso, COMIX, CircSpaceTime, DBR, DrBats, EcoDiet, EpiEstim, EpiLPS, EpiModel, EvidenceSynthesis, FAVAR, IFP, JMbayes2, JointAI, LAWBL, LDATS, MCMCvis, MJMbamlss, MPTmultiverse, MSGARCH, MetaLandSim, MetaStan, MethComp, MfUSampler, MigConnectivity, MixSIAR, MplusAutomation, NMADiagT, NestedCategBayesImpute, NobBS, PINstimation, PLMIX, POUMM, PVAClone, PhaseType, R2MLwiN, R2OpenBUGS, R2admb, R2jags, RMark, RPANDA, RcmdrPlugin.RMTCJags, RoBSA, SAME, SeqFeatR, SimBIID, TreeBUGS, UPG, adaptsmoFMRI, agRee, aihuman, altmeta, ammiBayes, aphylo, apollo, arm, auRoc, baker, bamp, bartcs, bayesGARCH, bayesLife, bayesMRM, bayesMig, bayesPO, bayesTFR, bayesbr, bayescount, bayeslm, bayesmix, bayesvl, bcf, bcgam, bfw, bgsmtr, bgumbel, bipd, bite, blapsr, blavaan, bnma, bpr, bridgesampling, brms, brms.mmrm, brokenstick, broom.mixed, bsam, bspcov, bssm, btergm, compareMCMCs, countSTAR, crossnma, ctmcd, dcmle, deBInfer, diagis, dmbc, dreamer, eSIR, eggCounts, eiPack, emdbook, ergm, evolqg, evolvability, ewoc, exdqlm, fabMix, factor.switching, fdasrvf, fitode, fmcmc, geiger, geoBayes, ggdmc, greta, hSDM, hdpGLM, immer, isotracer, ivdoctr, jSDM, jagsUI, jagstargets, krige, latentnet, lcra, list, llbayesireg, lsirm12pl, lvmcomp, marked, mcmcOutput, mcmcr, mcp, mdmb, metaBMA, miWQS, midas2, missingHE, mixAK, morse, motmot, msaeHB, multibridge, multimark, multinomialLogitMix, multinomineq, nLTT, neojags, netcmc, nimble, nimbleCarbon, nlist, nse, optimalThreshold, ordinalbayes, pcnetmeta, phytools, plotMCMC, pmwg, polySegratioMM, pomp, pompp, postpack, prevalence, ptycho, qgg, qrjoint, r4ss, ratematrix, rbacon, ref.ICAR, remiod, rjmcmc, rpm, rr, rtmpt, runMCMCbtadjust, runjags, rwty, saeHB, saeHB.ME, saeHB.ME.beta, saeHB.ZIB, saeHB.panel, saeHB.panel.beta, saeHB.unit, sbde, scape, seeds, shrinkDSM, shrinkTVP, slfm, sns, spAbundance, spBayes, spBayesSurv, spOccupancy, spTDyn, spTimer, sparsereg, spatialreg, spflow, sphet, spikeSlabGAM, sspse, statnet.common, stocc, stochvol, superdiag, telefit, tergm, tidybayes, trialr, vICC, walker, wiqid, wv, yuima, zic.

Depended on by ArchaeoChron, ArchaeoPhases, BAYSTAR, BMAmevt, BSPADATA, BayLum, BayesARIMAX, BayesFactor, BayesLCA, BayesTwin, DPP, EpiILM, EpiILMCT, FME, HelpersMG, Hmsc, ISEtools, InSilicoVA, MCMC.OTU, MCMC.qpcr, MCMCglmm, MCMCpack, MCMCtreeR, PICBayes, R2WinBUGS, RGE, TESS, Ultimixt, adaptMCMC, bamlss, bayesDccGarch, bayesSurv, bhm, bhpm, bkmrhat, blatent, boral, bvartools, c212, coalescentMCMC, cplm, cubfits, dclone, elrm, endorse, gconsensus, gemtc, gfiExtremes, icenReg, lira, mcgibbsit, mcmcplots, metropolis, multiocc, ocomposition, pexm, phase1PRMD, phase1RMD, popReconstruct, ramps, relevent, rjags, robustsae, spNNGP, spsurv, zoib.

Suggested by AdMit, AnaCoDa, BCEA, BGGE, BVAR, BaM, ContRespPP, HDInterval, LAM, LNIRT, Luminescence, MBNMAdose, R2BayesX, SALTSampler, SIBER, TAM, TransPhylo, afdx, airGR, amen, bayesImageS, bayesanova, bayesianVARs, bayest, bmstdr, broom, bsreg, camtrapR, embryogrowth, emmeans, ergmito, factorstochvol, gap, ggmcmc, glmmTMB, glmmfields, handwriter, icensBKL, lmls, mcmcderive, mcmcensemble, mcmcsae, metamisc, miceadds, nimbleAPT, nimbleNoBounds, nimbleSCR, nmathresh, noisyCE2, outbreaker2, parameters, pscl, purgeR, rater, rbi, redist, rstan, season, shinystan, simlandr, simpleMH, sirt, snSMART, spBFA, spCP, surveillance, texreg, womblR, zoo.


See at CRAN