Estimating a Diet Matrix from Biotracer and Stomach Content Data

Biotracers and stomach content analyses are combined in a Bayesian hierarchical model to estimate a probabilistic topology matrix (all trophic link probabilities) and a diet matrix (all diet proportions). The package relies on the JAGS software and the 'rjags' package to run a Markov chain Monte Carlo approximation of the different variables.


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install.packages("EcoDiet")

1.0.0 by Pierre-Yves Hernvann, 7 months ago


https://github.com/pyhernvann/EcoDiet


Report a bug at https://github.com/pyhernvann/EcoDiet/issues


Browse source code at https://github.com/cran/EcoDiet


Authors: Heloise Thero [aut] , Pierre-Yves Hernvann [cre, aut] , Didier Gascuel [aut] , Dorothee Kopp [aut] , Marianne Robert [aut] , Jerome Guitton [aut] , Etienne Rivot [aut]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports ggplot2, rjags, coda, stats, utils

Suggests knitr, rmarkdown, devtools

System requirements: JAGS (>= 4.3)


See at CRAN