Bayesian Modeling and Analysis of Spatially Correlated Survival Data

Provides several Bayesian survival models for spatial/non-spatial survival data: proportional hazards (PH), accelerated failure time (AFT), proportional odds (PO), and accelerated hazards (AH), a super model that includes PH, AFT, PO and AH as special cases, Bayesian nonparametric nonproportional hazards (LDDPM), generalized accelerated failure time (GAFT), and spatially smoothed Polya tree density estimation. The spatial dependence is modeled via frailties under PH, AFT, PO, AH and GAFT, and via copulas under LDDPM and PH. Model choice is carried out via the logarithm of the pseudo marginal likelihood (LPML), the deviance information criterion (DIC), and the Watanabe-Akaike information criterion (WAIC).


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install.packages("spBayesSurv")

1.1.3 by Haiming Zhou, a year ago


Browse source code at https://github.com/cran/spBayesSurv


Authors: Haiming Zhou <[email protected]> and Timothy Hanson <[email protected]>


Documentation:   PDF Manual  


Task views: Survival Analysis, Analysis of Spatial Data


GPL (>= 2) license


Imports Rcpp, survival, coda, methods, MASS, fields, splines

Suggests knitr

Linking to Rcpp, RcppArmadillo


See at CRAN