Reference manual

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2.11.1 by Klaus Schliep, a year ago,

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Authors: Klaus Schliep [aut, cre] , Emmanuel Paradis [aut] , Leonardo de Oliveira Martins [aut] , Alastair Potts [aut] , Iris Bardel-Kahr [aut] , Tim W. White [ctb] , Cyrill Stachniss [ctb] , Michelle Kendall [ctb] , Keren Halabi [ctb] , Richel Bilderbeek [ctb] , Kristin Winchell [ctb] , Liam Revell [ctb] , Mike Gilchrist [ctb] , Jeremy Beaulieu [ctb] , Brian O'Meara [ctb] , Long Qu [ctb] , Joseph Brown [ctb] , Santiago Claramunt [ctb]

Documentation:   PDF Manual  

GPL (>= 2) license

Imports digest, fastmatch, generics, graphics, grDevices, igraph, Matrix, methods, parallel, quadprog, Rcpp, stats, utils

Depends on ape

Suggests Biostrings, knitr, magick, rgl, rmarkdown, seqinr, seqLogo, tinytest, xtable

Linking to Rcpp

Imported by BSS, BoSSA, DCLEAR, EnvNJ, LDM, OUwie, POMS, RPANDA, STraTUS, SeqFeatR, TML, TreeDist, beastier, coalescentMCMC, corHMM, datelife, dispRity, dowser, genBaRcode, haplotypes, hisse, indelmiss, ips, markophylo, microbial, nodeSub, paleotree, pcmabc, phyloregion, phytools, rapidphylo, recluster, rwty, scistreer, sketching, taxize, treespace.

Depended on by MSCquartets, MonoPhy, apex, windex.

Suggested by CongreveLamsdell2016, MiscMetabar, Platypus, Quartet, RRphylo, RevGadgets, TreeSearch, TreeTools, ape, gromovlab, pagoo, shipunov, tracerer.

Enhanced by dendextend.

See at CRAN