Reference manual

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2.8.1 by Klaus Schliep, 5 months ago

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Authors: Klaus Schliep [aut, cre] , Emmanuel Paradis [aut] , Leonardo de Oliveira Martins [aut] , Alastair Potts [aut] , Tim W. White [aut] , Cyrill Stachniss [ctb] , Michelle Kendall [ctb] , Keren Halabi [ctb] , Richel Bilderbeek [ctb] , Kristin Winchell [ctb] , Liam Revell [ctb] , Mike Gilchrist [ctb] , Jeremy Beaulieu [ctb] , Brian O'Meara [ctb] , Long Qu [ctb]

Documentation:   PDF Manual  

GPL (>= 2) license

Imports fastmatch, graphics, grDevices, igraph, Matrix, methods, parallel, quadprog, Rcpp, stats, utils

Depends on ape

Suggests Biostrings, knitr, magick, prettydoc, rgl, rmarkdown, seqinr, seqLogo, tinytest, xtable

Linking to Rcpp

Imported by BSS, BoSSA, CommT, DCLEAR, EnvNJ, OUwie, STraTUS, SeqFeatR, TreeDist, babette, beastier, coalescentMCMC, corHMM, dispRity, dowser, genBaRcode, haplotypes, hisse, immunarch, indelmiss, ips, liayson, markophylo, microbial, nodeSub, paleotree, pcmabc, phyloregion, phytools, prewas, recluster, rwty, taxize, timetree, treespace.

Depended on by MSCquartets, MonoPhy, apex, windex.

Suggested by CongreveLamsdell2016, Quartet, RRphylo, TreeSearch, TreeTools, ape, gromovlab, pagoo, shipunov, tracerer.

See at CRAN