Phylogenetic Ridge Regression Methods for Comparative Studies

Functions for phylogenetic analysis (Castiglione et al, 2018 ). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.


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install.packages("RRphylo")

2.4.11 by Pasquale Raia, 25 days ago


Browse source code at https://github.com/cran/RRphylo


Authors: Pasquale Raia , Silvia Castiglione , Carmela Serio , Alessandro Mondanaro , Marina Melchionna , Mirko Di Febbraro , Antonio Profico , Francesco Carotenuto


Documentation:   PDF Manual  


GPL-2 license


Imports ape, phytools, geiger, stats4, foreach, doParallel, parallel

Depends on emmeans

Suggests phangorn, rlist, scales, R.utils, cluster, RColorBrewer, nlme, car, smatr, picante, vegan, ddpcr, geomorph, rmarkdown, knitr, kableExtra, plotrix, pdftools, rgl, mvMORPH, ggplot2, qpdf, inflection, Rvcg, Morpho, evolqg


See at CRAN