Model Comparison Using 'babette'

'BEAST2' (< https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'mcbette' allows to do a Bayesian model comparison over some site and clock models, using 'babette' (< https://github.com/ropensci/babette/>).


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Reference manual

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install.packages("mcbette")

1.12 by Richèl J.C. Bilderbeek, 16 days ago


https://github.com/ropensci/mcbette/


Report a bug at https://github.com/ropensci/mcbette/issues


Browse source code at https://github.com/cran/mcbette


Authors: Richèl J.C. Bilderbeek [aut, cre] , Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci , see https://github.com/ropensci/software-review/issues/360) , Vikram Baliga [rev] (Vikram reviewed the package for rOpenSci , see https://github.com/ropensci/software-review/issues/360 ,


Documentation:   PDF Manual  


GPL-3 license


Imports babette, beautier, beastier, curl, devtools, mauricer, Rmpfr, testit, txtplot

Suggests ape, ggplot2, hunspell, knitr, lintr, nLTT, phangorn, rappdirs, rmarkdown, spelling, stringr, testthat, tracerer

System requirements: BEAST2 (https://www.beast2.org/)


See at CRAN