Call 'BEAST2'

'BEAST2' (< http://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAST2' is a command-line tool. This package provides a way to call 'BEAST2' from an 'R' function call.


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Reference manual

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install.packages("beastier")

2.1.1 by Richèl J.C. Bilderbeek, 3 days ago


https://docs.ropensci.org/beastier (website) https://github.com/ropensci/beastier


Report a bug at https://github.com/ropensci/beastier


Browse source code at https://github.com/cran/beastier


Authors: Richèl J.C. Bilderbeek [aut, cre] , Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci , see https://github.com/ropensci/onboarding/issues/209) , David Winter [rev] (David reviewed the package for rOpenSci , see https://github.com/ropensci/onboarding/issues/209) , Thijs Janzen [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports ape, assertive, phangorn, rappdirs, remotes, rJava, stringr, xml2

Depends on beautier

Suggests hunspell, knitr, rmarkdown, spelling, testit, testthat, tracerer

System requirements: BEAST2 (http://www.beast2.org/)


Depended on by mauricer.


See at CRAN