Call 'BEAST2'

'BEAST2' (<>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAST2' is a command-line tool. This package provides a way to call 'BEAST2' from an 'R' function call.


Reference manual

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2.4.8 by Richèl J.C. Bilderbeek, a month ago (website)

Report a bug at

Browse source code at

Authors: Richèl J.C. Bilderbeek [aut, cre] , Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci , see , David Winter [rev] (David reviewed the package for rOpenSci , see , Jason Griffiths [ctb] , Thijs Janzen [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports ape, assertive, beautier, devtools, phangorn, rappdirs, readr, rJava, stringr, tibble, xml2

Suggests hunspell, knitr, markdown, rmarkdown, spelling, testit, testthat, tracerer

System requirements: BEAST2 (

Imported by nodeSub.

Depended on by babette, mauricer.

See at CRAN