Allows to Explore Monophyly (or Lack of it) of Taxonomic Groups in a Phylogeny

Requires rooted resolved phylogeny as input and creates a table of genera, their monophyly-status, which taxa cause problems in monophyly etc. Different information can be extracted from the output and a plot function allows visualization of the results in a number of ways.

R package to explore monophyly Build Status


Reference manual

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1.2 by Orlando Schwery, 3 years ago

Browse source code at

Authors: Orlando Schwery

Documentation:   PDF Manual  

GPL-3 license

Depends on ape, phytools, phangorn, RColorBrewer, taxize

Suggests knitr, testthat, spacodiR, rmarkdown

See at CRAN