Reference manual

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install.packages("dendextend")

1.15.2 by Tal Galili, 7 months ago


http://talgalili.github.io/dendextend/, https://github.com/talgalili/dendextend/, https://cran.r-project.org/package=dendextend, https://www.r-statistics.com/tag/dendextend/, https://academic.oup.com/bioinformatics/article/31/22/3718/240978/dendextend-an-R-package-for-visualizing-adjusting


Report a bug at https://github.com/talgalili/dendextend/issues


Browse source code at https://github.com/cran/dendextend


Authors: Tal Galili [aut, cre, cph] (https://www.r-statistics.com) , Yoav Benjamini [ths] , Gavin Simpson [ctb] , Gregory Jefferis [aut, ctb] (imported code from his dendroextras package) , Marco Gallotta [ctb] (a.k.a: marcog) , Johan Renaudie [ctb] (https://github.com/plannapus) , The R Core Team [ctb] (Thanks for the Infastructure , and code in the examples) , Kurt Hornik [ctb] , Uwe Ligges [ctb] , Andrej-Nikolai Spiess [ctb] , Steve Horvath [ctb] , Peter Langfelder [ctb] , skullkey [ctb] , Mark Van Der Loo [ctb] (https://github.com/markvanderloo d3dendrogram) , Andrie de Vries [ctb] (ggdendro author) , Zuguang Gu [ctb] (circlize author) , Cath [ctb] (https://github.com/CathG) , John Ma [ctb] (https://github.com/JohnMCMa) , Krzysiek G [ctb] (https://github.com/storaged) , Manuela Hummel [ctb] (https://github.com/hummelma) , Chase Clark [ctb] (https://github.com/chasemc) , Lucas Graybuck [ctb] (https://github.com/hypercompetent) , jdetribol [ctb] (https://github.com/jdetribol) , Ben Ho [ctb] (https://github.com/SplitInf) , Samuel Perreault [ctb] (https://github.com/samperochkin) , Christian Hennig [ctb] (http://www.homepages.ucl.ac.uk/~ucakche/) , David Bradley [ctb] (https://github.com/DBradley27) , Houyun Huang [ctb] (https://github.com/houyunhuang)


Documentation:   PDF Manual  


GPL-2 | GPL-3 license


Imports utils, stats, datasets, magrittr, ggplot2, viridis

Suggests knitr, rmarkdown, testthat, seriation, colorspace, ape, microbenchmark, gplots, heatmaply, dynamicTreeCut, pvclust, corrplot, DendSer, MASS, cluster, fpc, circlize, covr

Enhances ggdendro, dendroextras, Hmisc, data.table, rpart


Imported by BasketballAnalyzeR, BiBitR, CALANGO, CINNA, Cluster.OBeu, FlexDotPlot, Mercator, Momocs, OmicInt, conos, elaborator, factoextra, heatmaply, hfr, ldaPrototype, mFD, mappoly, metaprotr, onemap, pagoo, rSAFE, rabhit, rainette, tidyHeatmap, tsibbletalk, visxhclust.

Depended on by EnsCat, PdPDB, uclust.

Suggested by AntMAN, ClustAssess, DatabionicSwarm, FCPS, IncDTW, ProjectionBasedClustering, celltrackR, circlize, dbscan, iconr, isocat, kmer, mdendro, perfectphyloR, pergola, phylogram, plotly, protti, rare, sarp.snowprofile.alignment, seriation, sharpshootR, spiralize.


See at CRAN