Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses

Analysis of molecular marker data from model (backcrosses, F2 and recombinant inbred lines) and non-model systems (i. e. outcrossing species). For the later, it allows statistical analysis by simultaneously estimating linkage and linkage phases (genetic map construction) according to Wu et al. (2002) . All analysis are based on multipoint approaches using hidden Markov models.


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2.1.3 by Cristiane Taniguti, a year ago

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Authors: Gabriel Margarido [aut] , Marcelo Mollinari [aut] , Karl Broman [ctb] , Getulio Ferreira [ctb] , Rodrigo Amadeu [ctb] , Cristiane Taniguti [ctb, cre] , Augusto Garcia [aut, ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports ggplot2, plotly, reshape2, Rcpp, graphics, methods, stats, utils, grDevices, MDSMap

Suggests qtl, knitr, rmarkdown, htmlwidgets, vcfR

Linking to Rcpp

See at CRAN