Construction of Genetic Maps in Experimental Crosses: Full-Sib, RILs, F2 and Backcrosses

Analysis of molecular marker data from model (backcrosses, F2 and recombinant inbred lines) and non-model systems (i. e. outcrossing species). For the later, it allows statistical analysis by simultaneously estimating linkage and linkage phases (genetic map construction) according to Wu et al. (2002) . All analysis are based on multipoint approaches using hidden Markov models.


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install.packages("onemap")

2.1.1 by Cristiane Taniguti, 2 years ago


https://github.com/augusto-garcia/onemap


Report a bug at https://github.com/augusto-garcia/onemap/wiki


Browse source code at https://github.com/cran/onemap


Authors: Gabriel Margarido [aut] , Marcelo Mollinari [aut] , Karl Broman [ctb] , Rodrigo Amadeu [ctb] , Cristiane Taniguti [ctb, cre] , Augusto Garcia [aut, ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports tcltk, tkrplot, ggplot2, fields, reshape2, Rcpp, graphics, methods, stats, utils, maps

Suggests qtl, knitr, rmarkdown

Linking to Rcpp


See at CRAN