Reference manual

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1.4.0 by Teng Gao, 4 months ago,

Browse source code at

Authors: Teng Gao [cre, aut] , Ruslan Soldatov [aut] , Hirak Sarkar [aut] , Evan Biederstedt [aut] , Peter Kharchenko [aut]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports ape, caTools, data.table, dendextend, dplyr, GenomicRanges, ggplot2, ggraph, ggtree, glue, hahmmr, igraph, IRanges, logger, magrittr, methods, optparse, parallel, parallelDist, patchwork, pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer, stats4, stringr, tibble, tidygraph, tidyr, vcfR, zoo

Depends on Matrix

Suggests ggrastr, ggrepel, knitr, matrixStats, testthat

Linking to Rcpp, RcppArmadillo, roptim

System requirements: GNU make

See at CRAN