Reference manual

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install.packages("numbat")

1.4.0 by Teng Gao, 4 months ago


https://github.com/kharchenkolab/numbat/, https://kharchenkolab.github.io/numbat/


Browse source code at https://github.com/cran/numbat


Authors: Teng Gao [cre, aut] , Ruslan Soldatov [aut] , Hirak Sarkar [aut] , Evan Biederstedt [aut] , Peter Kharchenko [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports ape, caTools, data.table, dendextend, dplyr, GenomicRanges, ggplot2, ggraph, ggtree, glue, hahmmr, igraph, IRanges, logger, magrittr, methods, optparse, parallel, parallelDist, patchwork, pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer, stats4, stringr, tibble, tidygraph, tidyr, vcfR, zoo

Depends on Matrix

Suggests ggrastr, ggrepel, knitr, matrixStats, testthat

Linking to Rcpp, RcppArmadillo, roptim

System requirements: GNU make


See at CRAN