Reference manual

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1.2.1 by Teng Gao, 24 days ago

Browse source code at

Authors: Teng Gao [cre, aut] , Hirak Sarkar [aut] , Evan Biederstedt [aut] , Peter Kharchenko [aut]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports ape, caTools, data.table, dendextend, dplyr, GenomicRanges, ggplot2, ggraph, ggtree, glue, igraph, IRanges, logger, magrittr, methods, optparse, parallel, parallelDist, patchwork, pryr, purrr, Rcpp, RhpcBLASctl, R.utils, scales, scistreer, stats4, stringr, tibble, tidygraph, tidyr, vcfR, zoo

Depends on Matrix

Suggests ggrastr, ggrepel, knitr, matrixStats, testthat

Linking to Rcpp, RcppArmadillo, roptim

System requirements: C++11, GNU make

See at CRAN