Tools for Assessing Clustering

A set of tools for evaluating clustering similarity across methods and method stability using element-centric clustering comparison (Gates et al. (2019) ). Additionally, this package enables data-wide assessment of clustering robustness using proportion of ambiguously clustered pairs (Senbabaoglu et al. (2014) ), which can be used to infer the optimal number of clusters in the data.


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install.packages("ClustAssess")

0.1.1 by Arash Shahsavari, 8 months ago


https://github.com/Core-Bioinformatics/ClustAssess


Browse source code at https://github.com/cran/ClustAssess


Authors: Arash Shahsavari [aut, cre] , Irina Mohorianu [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports ggplot2, dplyr, fastcluster, rlang, Matrix, igraph, magrittr, Rcpp, methods, stats

Suggests knitr, rmarkdown, e1071, dbscan, dendextend, Seurat

Linking to Rcpp


See at CRAN