Reference manual

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install.packages("SeuratObject")

5.0.2 by Rahul Satija, 3 months ago


https://satijalab.github.io/seurat-object/, https://github.com/satijalab/seurat-object


Report a bug at https://github.com/satijalab/seurat-object/issues


Browse source code at https://github.com/cran/SeuratObject


Authors: Paul Hoffman [aut] , Rahul Satija [aut, cre] , David Collins [aut] , Yuhan Hao [aut] , Austin Hartman [aut] , Gesmira Molla [aut] , Andrew Butler [aut] , Tim Stuart [aut] , Madeline Kowalski [ctb] , Saket Choudhary [ctb] , Skylar Li [ctb] , Longda Jiang [ctb] , Jeff Farrell [ctb] , Shiwei Zheng [ctb] , Christoph Hafemeister [ctb] , Patrick Roelli [ctb]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports future, future.apply, grDevices, grid, Matrix, methods, progressr, Rcpp, rlang, stats, tools, utils, spam, lifecycle, generics

Depends on sp

Suggests DelayedArray, fs, ggplot2, HDF5Array, rmarkdown, testthat, BPCells, sf

Enhances Seurat

Linking to Rcpp, RcppEigen


Imported by APackOfTheClones, CAMML, SCIntRuler, Signac, bbknnR, scAnnotate, scCustomize, scaper, scpoisson.

Depended on by Seurat, tidyseurat.

Suggested by CytoSimplex, RESET, SCpubr, SPECK, SpaTopic, VAM, cellpypes, rliger, scOntoMatch, singleCellHaystack.


See at CRAN