Reference manual

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install.packages("uwot")

0.2.2 by James Melville, a month ago


https://github.com/jlmelville/uwot, https://jlmelville.github.io/uwot/


Report a bug at https://github.com/jlmelville/uwot/issues


Browse source code at https://github.com/cran/uwot


Authors: James Melville [aut, cre, cph] , Aaron Lun [ctb] , Mohamed Nadhir Djekidel [ctb] , Yuhan Hao [ctb] , Dirk Eddelbuettel [ctb]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports FNN, irlba, methods, Rcpp, RcppAnnoy, RSpectra

Depends on Matrix

Suggests bigstatsr, covr, knitr, RcppHNSW, rmarkdown, rnndescent, testthat

Linking to dqrng, Rcpp, RcppAnnoy, RcppProgress


Imported by BioM2, ClustAssess, EmbedSOM, HDStIM, Seurat, WormTensor, bbknnR, embed, fastTopics, iCellR, mxnorm, rliger, scDHA, scROSHI, sccore, symphony.

Suggested by Evacluster, MOCHA, NGCHM, ProjectionBasedClustering, SCIBER, TreeDist, bundle, celltrackR, conos, doc2vec, dyndimred, graphlayouts, healthyR.ai, pagoda2, qeML, solitude, textplot, topicmodels.etm.


See at CRAN