Provides a smooth mapping of multidimensional points into low-dimensional space defined by a self-organizing map. Designed to work with 'FlowSOM' and flow-cytometry use-cases. See Kratochvil et al. (2019) .
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2.1.1 by Mirek Kratochvil, 7 months ago
https://bioinfo.uochb.cas.cz/embedsom
Browse source code at https://github.com/cran/EmbedSOM
Authors: Mirek Kratochvil [aut, cre] , Sofie Van Gassen [cph] , Britt Callebaut [cph] , Yvan Saeys [cph] , Ron Wehrens [cph]
Documentation: PDF Manual
GPL (>= 3) license
Imports FNN, ggplot2, igraph, Matrix, Rtsne, umap, uwot
Suggests knitr, rmarkdown
See at CRAN