Efficient and Precise Single-Cell Reference Atlas Mapping

Implements the Symphony single-cell reference building and query mapping algorithms and additional functions described in Kang et al < https://www.biorxiv.org/content/10.1101/2020.11.18.389189v2>.


Reference manual

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0.1.0 by Joyce Kang, 6 months ago

Browse source code at https://github.com/cran/symphony

Authors: Joyce Kang [aut, cre] , Ilya Korsunsky [aut] , Soumya Raychaudhuri [aut]

Documentation:   PDF Manual  

GPL (>= 3) license

Imports methods, Rcpp, harmony, uwot, irlba, class, purrr, dplyr, ggplot2, stats, utils, magrittr, data.table, tibble, Matrix, tidyr, rlang, RColorBrewer, ggrastr, ggrepel, RANN

Suggests knitr, rmarkdown, testthat, ggthemes

Linking to Rcpp, RcppArmadillo

See at CRAN