Efficient and Precise Single-Cell Reference Atlas Mapping

Implements the Symphony single-cell reference building and query mapping algorithms and additional functions described in Kang et al < https://www.biorxiv.org/content/10.1101/2020.11.18.389189v2>.


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install.packages("symphony")

0.1.0 by Joyce Kang, 2 months ago


Browse source code at https://github.com/cran/symphony


Authors: Joyce Kang [aut, cre] , Ilya Korsunsky [aut] , Soumya Raychaudhuri [aut]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports methods, Rcpp, harmony, uwot, irlba, class, purrr, dplyr, ggplot2, stats, utils, magrittr, data.table, tibble, Matrix, tidyr, rlang, RColorBrewer, ggrastr, ggrepel, RANN

Suggests knitr, rmarkdown, testthat, ggthemes

Linking to Rcpp, RcppArmadillo


See at CRAN