Reference manual

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1.0.0 by Chao Gao, 2 years ago

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Authors: Joshua Welch [aut, ctb] , Chao Gao [aut, ctb, cre] , Jialin Liu [aut, ctb] , Joshua Sodicoff [aut, ctb] , Velina Kozareva [aut, ctb] , Evan Macosko [aut, ctb] , Paul Hoffman [ctb] , Ilya Korsunsky [ctb] , Robert Lee [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports Rcpp, plyr, FNN, dplyr, grid, ggrepel, irlba, ica, Rtsne, ggplot2, riverplot, foreach, parallel, doParallel, mclust, stats, psych, RANN, uwot, rlang, utils, hdf5r

Depends on cowplot, Matrix, methods, patchwork

Suggests Seurat, knitr, reticulate, rmarkdown, testthat, GenomicRanges, S4Vectors, IRanges,, reactome.db, fgsea, AnnotationDbi

Linking to Rcpp, RcppArmadillo, RcppEigen, RcppProgress

Suggested by scCustomize.

See at CRAN