Visualising Single-Cell Trajectories

Visualise a single-cell trajectory as a graph or dendrogram, as a dimensionality reduction or heatmap of the expression data, or a comparison between two trajectories as a pairwise scatterplot or dimensionality reduction projection. Saelens and Cannoodt et al. (2019) .


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install.packages("dynplot")

1.1.1 by Robrecht Cannoodt, a month ago


https://github.com/dynverse/dynplot


Report a bug at https://github.com/dynverse/dynplot/issues


Browse source code at https://github.com/cran/dynplot


Authors: Robrecht Cannoodt [aut, cre, cph] , Wouter Saelens [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports assertthat, dplyr, dynutils, dynfeature, dyndimred, dynwrap, GA, ggforce, ggplot2, ggraph, ggrepel, igraph, MASS, methods, patchwork, purrr, reshape2, tibble, tidyr, tidygraph, vipor

Suggests covr, hexbin, knitr, RColorBrewer, rje, rmarkdown, testthat, uwot


See at CRAN