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1.1.0 by Imran McGrath, 10 months ago

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Browse source code at https://github.com/cran/MOCHA

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Authors: Samir Rachid Zaim [aut, ctb] , Mark-Phillip Pebworth [aut, ctb] , Imran McGrath [aut, cre] , Lauren Okada [aut, ctb] , Xiaojun Li [aut, ctb]

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Documentation:   PDF Manual  

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GPL (>= 3) license

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Imports data.table, plyranges, dplyr, GenomicRanges, RaggedExperiment, MultiAssayExperiment, SummarizedExperiment, stringr, ggbio, wCorr, magrittr, rlang, AnnotationDbi, BiocGenerics, GenomeInfoDb, GenomicFeatures, IRanges, S4Vectors, assertthat, ensembldb, ggplot2, ggrepel, matrixStats, methods, qvalue, scales, tidyr, ggridges, pbapply, BSgenome, tidyselect, lifecycle

Suggests ArchR, RMariaDB, motifmatchr, BiocManager, TxDb.Hsapiens.UCSC.hg38.refGene, TxDb.Hsapiens.UCSC.hg19.knownGene, org.Hs.eg.db, BSgenome.Hsapiens.UCSC.hg19, withr, knitr, rmarkdown, chromVAR, testthat, uwot, irlba, glmmTMB, Matrix, waldo, purrr, lmerTest, Biobase, lme4, zip, rtracklayer, cowplot, mixtools, zoo

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See at CRAN