METACRAN

scales — 1.3.0

a year ago by Thomas Lin Pedersen

Scale Functions for Visualization

ScaleSpikeSlab — 1.0

3 years ago by Niloy Biswas

Scalable Spike-and-Slab

scalpel — 1.0.3

4 years ago by Ashley Petersen

Processes Calcium Imaging Data

scalreg — 1.0.1

6 years ago by Tingni Sun

Scaled Sparse Linear Regression

scam — 1.2-17

5 months ago by Natalya Pya

Shape Constrained Additive Models

scan — 0.61.0

5 months ago by Juergen Wilbert

Single-Case Data Analyses for Single and Multiple Baseline Designs

scAnnotate — 0.3

8 months ago by Xuekui Zhang

An Automated Cell Type Annotation Tool for Single-Cell RNA-Sequencing Data

scanstatistics — 1.1.1

2 years ago by Paul Romer Present

Space-Time Anomaly Detection using Scan Statistics

scape — 2.3.5

a month ago by Arni Magnusson

Statistical Catch-at-Age Plotting Environment

scaper — 0.1.0

a year ago by Azka Javaid

Single Cell Transcriptomics-Level Cytokine Activity Prediction and Estimation

scapesClassification — 1.0.0

3 years ago by Gerald H. Taranto

User-Defined Classification of Raster Surfaces

scapGNN — 0.1.4

a year ago by Xudong Han

Graph Neural Network-Based Framework for Single Cell Active Pathways and Gene Modules Analysis

scar — 0.2-2

2 years ago by Yining Chen

Shape-Constrained Additive Regression: a Maximum Likelihood Approach

scaRabee — 1.1-4

3 years ago by Sebastien Bihorel

Optimization Toolkit for Pharmacokinetic-Pharmacodynamic Models

scatr — 1.0.1

7 years ago by Ravi Selker

Create Scatter Plots with Marginal Density or Box Plots

scatterD3 — 1.0.1

3 years ago by Julien Barnier

D3 JavaScript Scatterplot from R

ScatterDensity — 0.0.4

a year ago by Michael Thrun

Density Estimation and Visualization of 2D Scatter Plots

scattermore — 1.2

a year ago by Mirek Kratochvil

Scatterplots with More Points

scatterpie — 0.2.4

3 months ago by Guangchuang Yu

Scatter Pie Plot

scatterplot3d — 0.3-44

2 years ago by Uwe Ligges

3D Scatter Plot

scatterPlotMatrix — 0.3.0

5 months ago by David Chazalviel

`htmlwidget` for a Scatter Plot Matrix

SCBiclust — 1.0.1

2 years ago by Erika S. Helgeson

Identifies Mean, Variance, and Hierarchically Clustered Biclusters

scBio — 0.1.6

5 years ago by Amit Frishberg

Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data

SCBmeanfd — 1.2.2

8 years ago by David Degras

Simultaneous Confidence Bands for the Mean of Functional Data

scBSP — 1.0.0

7 months ago by Jinpu Li

A Fast Tool for Single-Cell Spatially Variable Genes Identifications on Large-Scale Data

scbursts — 1.6

5 years ago by Blair Drummond

Single Channel Bursts Analysis

scCAN — 1.0.5

5 months ago by Bang Tran

Single-Cell Clustering using Autoencoder and Network Fusion

scCATCH — 3.2.2

2 years ago by Xin Shao

Single Cell Cluster-Based Annotation Toolkit for Cellular Heterogeneity

sccca — 0.1.1

8 months ago by Mohamed Soudy

Single-Cell Correlation Based Cell Type Annotation

SCCI — 1.2

5 years ago by Alexander Marx

Stochastic Complexity-Based Conditional Independence Test for Discrete Data

scclust — 0.2.5

4 months ago by Fredrik Savje

Size-Constrained Clustering

sccore — 1.0.5

9 months ago by Evan Biederstedt

Core Utilities for Single-Cell RNA-Seq

sccr — 2.1

4 years ago by Alicja Wolny-Dominiak

The Self-Consistent, Competing Risks (SC-CR) Algorithms

SCCS — 1.7

8 months ago by Yonas Ghebremichael Weldeselassie

The Self-Controlled Case Series Method

scCustomize — 2.1.2

9 months ago by Samuel Marsh

Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing

SCDA — 0.0.2

a month ago by Paolo Maranzano

Spatially-Clustered Data Analysis

SCDB — 0.4.1

2 months ago by Rasmus Skytte Randløv

Easily Access and Maintain Time-Based Versioned Data (Slowly-Changing-Dimension)

scDECO — 0.1.0

6 months ago by Anderson Bussing

Estimating Dynamic Correlation

SCdeconR — 1.0.0

8 months ago by Yuanhang Liu

Deconvolution of Bulk RNA-Seq Data using Single-Cell RNA-Seq Data as Reference

scdensity — 1.0.3

3 months ago by Mark A. Wolters

Shape-Constrained Kernel Density Estimation

scDHA — 1.2.2

8 months ago by Ha Nguyen

Single-Cell Decomposition using Hierarchical Autoencoder

scdhlm — 0.7.3

9 months ago by James Pustejovsky

Estimating Hierarchical Linear Models for Single-Case Designs

scDiffCom — 1.0.0

a year ago by Cyril Lagger

Differential Analysis of Intercellular Communication from scRNA-Seq Data

scDIFtest — 0.1.1

4 years ago by Dries Debeer

Item-Wise Score-Based DIF Detection

scdtb — 0.2.0

2 months ago by Mackson Ncube

Single Case Design Tools

scellpam — 1.4.6.2

4 months ago by Juan Domingo

Applying Partitioning Around Medoids to Single Cell Data with High Number of Cells

SCEM — 1.1.0

3 years ago by Kyung Serk Cho

Splitting-Coalescence-Estimation Method

scenes — 0.1.0

2 years ago by Jon Harmon

Switch Between Alternative 'shiny' UIs

SCEnt — 0.0.1

3 years ago by Hugh Warden

Single Cell Entropy Analysis of Gene Heterogeneity in Cell Populations

SCEPtER — 0.2-4

4 years ago by Matteo Dell'Omodarme

Stellar CharactEristics Pisa Estimation gRid

SCEPtERbinary — 0.1-1

10 years ago by Matteo Dell'Omodarme

Stellar CharactEristics Pisa Estimation gRid for Binary Systems

SCFMonitor — 0.3.5

2 months ago by Pengjun Guo

Clear Monitor and Graphing Software Processing Gaussian .log File

scGate — 1.6.2

7 months ago by Massimo Andreatta

Marker-Based Cell Type Purification for Single-Cell Sequencing Data

SCGLR — 3.0

6 years ago by Guillaume Cornu

Supervised Component Generalized Linear Regression

scGOclust — 0.2.1

10 months ago by Yuyao Song

Measuring Cell Type Similarity with Gene Ontology in Single-Cell RNA-Seq

scgwr — 0.1.2-21

3 years ago by Daisuke Murakami

Scalable Geographically Weighted Regression

sched — 1.0.3

2 months ago by Pierrick Roger

Request Scheduler

schemr — 0.3.0

5 months ago by Stuart Morrison

Convert Images to Usable Color Schemes

schoenberg — 2.0.3

10 months ago by Jeffrey A. Dahlke

Tools for 12-Tone Musical Composition

scholar — 0.2.4

2 years ago by Guangchuang Yu

Analyse Citation Data from Google Scholar

SchoolDataIT — 0.2.2

8 days ago by Leonardo Cefalo

Retrieve, Harmonise and Map Open Data Regarding the Italian School System

schoolmath — 0.4.2

a year ago by Jörg große Schlarmann

Functions and Datasets for Math Used in School

schoRsch — 1.11

4 days ago by Roland Pfister

Tools for Analyzing Factorial Experiments

schrute — 1.0.1

2 years ago by Brad Lindblad

The Entire Transcript from the Office in Tidy Format

schtools — 0.4.1

a year ago by Kelly Sovacool

Schloss Lab Tools for Reproducible Microbiome Research

schumaker — 1.2.1

3 years ago by Stuart Baumann

Schumaker Shape-Preserving Spline

SCI — 1.0-2

9 years ago by Lukas Gudmundsson

Standardized Climate Indices Such as SPI, SRI or SPEI

SCIBER — 0.2.2

2 years ago by Dailin Gan

Single-Cell Integrator and Batch Effect Remover

scico — 1.5.0

a year ago by Thomas Lin Pedersen

Colour Palettes Based on the Scientific Colour-Maps

scicomptools — 1.1.0

22 days ago by Angel Chen

Tools Developed by the NCEAS Scientific Computing Support Team

scidesignR — 1.0.0

3 years ago by Nathan Taback

Data Sets from Design and Analysis of Experiments and Observational Studies using R

scientific — 2024.2

6 months ago by Obinna Obianom

Highly Customizable 'rmarkdown' Theme for Scientific Reporting

scientoText — 0.1

8 years ago by Ashraf Uddin

Text & Scientometric Analytics

scifigure — 0.2

6 years ago by Prasad Patil

Visualize 'Reproducibility' and 'Replicability' in a Comparison of Scientific Studies

scimo — 0.0.2

6 months ago by Antoine BICHAT

Extra Recipes Steps for Dealing with Omics Data

SCINA — 1.2.0

5 years ago by Ze Zhang

A Semi-Supervised Category Identification and Assignment Tool

scINSIGHT — 0.1.4

2 years ago by Kun Qian

Interpretation of Heterogeneous Single-Cell Gene Expression Data

SCIntRuler — 0.99.6

4 months ago by Yue Lyu

Guiding the Integration of Multiple Single-Cell RNA-Seq Datasets

sciplot — 1.2-0

5 years ago by Manuel Morales

Scientific Graphing Functions for Factorial Designs

scipub — 1.2.3

8 months ago by David Pagliaccio

Summarize Data for Scientific Publication

sciRmdTheme — 0.1

2 years ago by Obinna Obianom

Upgraded 'Rmarkdown' Themes for Scientific Writing

scISR — 0.1.1

2 years ago by Duc Tran

Single-Cell Imputation using Subspace Regression

scistreer — 1.2.0

a year ago by Teng Gao

Maximum-Likelihood Perfect Phylogeny Inference at Scale

scitb — 0.2.1

2 months ago by Qiang Liu

Provides Some Useful Functions for Making Statistical Tables

scITD — 1.0.4

a year ago by Jonathan Mitchel

Single-Cell Interpretable Tensor Decomposition

SciViews — 0.9-13.1

5 years ago by Philippe Grosjean

SciViews - Main package

scLink — 1.0.1

4 years ago by Wei Vivian Li

Inferring Functional Gene Co-Expression Networks from Single Cell Data

sclr — 0.3.1

5 years ago by Arseniy Khvorov

Scaled Logistic Regression

sClust — 1.0

3 years ago by Emilie Poisson-Caillault

R Toolbox for Unsupervised Spectral Clustering

SCMA — 1.3.1

5 years ago by Tamal Kumar De

Single-Case Meta-Analysis

scMappR — 1.0.11

a year ago by Dustin Sokolowski

Single Cell Mapper

scModels — 1.0.4

2 years ago by Lisa Amrhein

Fitting Discrete Distribution Models to Count Data

scOntoMatch — 0.1.1

a year ago by Yuyao Song

Aligning Ontology Annotation Across Single Cell Datasets with 'scOntoMatch'

scoper — 1.3.0

a year ago by Susanna Marquez

Spectral Clustering-Based Method for Identifying B Cell Clones

SCOPRO — 0.1.0

2 years ago by Gabriele Lubatti

Score Projection Between in 'Vivo' and in 'Vitro' Datasets

SCOR — 1.1.2

a year ago by Debsurya De

Spherically Constrained Optimization Routine

score — 1.0.2

9 years ago by Jaejoon Song

A Package to Score Behavioral Questionnaires

scorecard — 0.4.4

7 months ago by Shichen Xie

Credit Risk Scorecard

scorecardModelUtils — 0.0.1.0

6 years ago by Arya Poddar

Credit Scorecard Modelling Utils

scoredec — 0.1.2

3 days ago by Christos Adam

S-Core Graph Decomposition

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