R Interface to 'Stan'

Expansion and additions to 'rstan' to facilitate pharmacokinetics (PK) and pharmacodynamics (PD) modeling with 'rstan'. A PKPD model often is specified via a set of ordinary differential equations(ODEs) and requires flexible and different routes of drug administrations. These features make PKPD modeling with plain 'rstan' challenging and tedious to code. 'stanette' provides a powerful Stan-compatible ODE solver ('LSODA') and mechanism/utilities that make easy specification of flexible dosing records.


Reference manual

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2.21.2 by Wenping Wang, a month ago

https://mc-stan.org/rstan/, https://discourse.mc-stan.org

Report a bug at https://github.com/stan-dev/rstan/issues/

Browse source code at https://github.com/cran/stanette

Authors: Yuan Xiong [aut] , Wenping Wang [cre, aut, cph] , rstan developers [aut] , Trustees of Columbia University [cph] , John Plevyak [ctb, cph] (dparser author) , Linda Petzold [ctb] (LSODA author)

Documentation:   PDF Manual  

GPL (>= 3) license

Imports methods, stats4, inline, gridExtra, Rcpp, RcppParallel, loo, pkgbuild, withr, V8, brew, coda

Depends on StanHeaders, ggplot2, lattice

Suggests RUnit, RcppEigen, BH, parallel, KernSmooth, shinystan, bayesplot, rmarkdown, rstantools, rstudioapi, Matrix, knitr

Linking to Rcpp, RcppEigen, BH, StanHeaders, RcppParallel

System requirements: GNU make, pandoc

See at CRAN