Reference manual

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install.packages("adegenet")

2.1.6 by Zhian N. Kamvar, a day ago


https://github.com/thibautjombart/adegenet


Browse source code at https://github.com/cran/adegenet


Authors: Thibaut Jombart [aut] , Zhian N. Kamvar [aut, cre] , Caitlin Collins [ctb] , Roman Lustrik [ctb] , Marie-Pauline Beugin [ctb] , Brian J. Knaus [ctb] , Peter Solymos [ctb] , Vladimir Mikryukov [ctb] , Klaus Schliep [ctb] , Tiago Maié [ctb] , Libor Morkovsky [ctb] , Ismail Ahmed [ctb] , Anne Cori [ctb] , Federico Calboli [ctb] , RJ Ewing [ctb] , Frédéric Michaud [ctb] , Rebecca DeCamp [ctb] , Alexandre Courtiol [ctb] , Lindsay V. Clark [ctb] , Pavel Dimens [ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Imports utils, stats, grDevices, MASS, igraph, ape, shiny, ggplot2, seqinr, parallel, boot, reshape2, dplyr, vegan

Depends on methods, ade4

Suggests adespatial, pegas, hierfstat, akima, maps, spdep, splancs, tripack, testthat, poppr


Imported by AlleleShift, DA, HierDpart, SNPfiltR, StAMPP, adephylo, apex, graph4lg, hierfstat, treespace.

Depended on by PopGenReport, dartR, mmod, poppr.

Suggested by RAINBOWR, memgene, pegas, polyRAD, polysat, quiddich, vcfR.


See at CRAN