Estimation and Tests of Hierarchical F-Statistics

Estimates hierarchical F-statistics from haploid or diploid genetic data with any numbers of levels in the hierarchy, following the algorithm of Yang (Evolution(1998), 52:950). Tests via randomisations the significance of each F and variance components, using the likelihood-ratio statistics G (Goudet et al. (1996) <>). Estimates genetic diversity statistics for haploid and diploid genetic datasets in various formats, including inbreeding and coancestry coefficients, and population specific F-statistics following Weir and Goudet (2017) <>.


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0.5-7 by Jerome Goudet, 9 months ago,

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Authors: Jerome Goudet [aut, cre] , Thibaut Jombart [aut] , Zhian N. Kamvar [ctb] , Eric Archer [ctb] , Olivier Hardy [ctb]

Documentation:   PDF Manual  

Task views: Statistical Genetics

GPL (>= 2) license

Imports ade4, adegenet, gaston, gtools, methods

Suggests ape, pegas, knitr, rmarkdown, testthat

Imported by GenomeAdmixR, HierDpart, dartR.

Suggested by adegenet.

See at CRAN