A Shiny App for UCSC Xena Database

Provides a web app for downloading, analyzing and visualizing datasets from UCSC Xena, which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.


0.2.0 by Shixiang Wang, 9 days ago


Report a bug at https://github.com/openbiox/XenaShiny/issues

Browse source code at https://github.com/cran/UCSCXenaShiny

Authors: Shixiang Wang [aut, cre] , Yi Xiong [aut] , Longfei Zhao [aut] , Kai Gu [aut] , Yin Li [aut] , Fei Zhao [aut]

Documentation:   PDF Manual  

MIT + file LICENSE license

Imports UCSCXenaTools, shiny, shinythemes, shinyjs, DT, dplyr, ggplot2, ggpubr, plotly, RColorBrewer, magrittr, shinyBS, utils, zip, tibble

Suggests covr, testthat

See at CRAN