Provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (< http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
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1.0.0 by Shixiang Wang, 15 hours ago
https://github.com/openbiox/UCSCXenaShiny
Report a bug at https://github.com/openbiox/UCSCXenaShiny/issues
Browse source code at https://github.com/cran/UCSCXenaShiny
Authors: Shixiang Wang [aut, cre] , Yi Xiong [aut] , Longfei Zhao [aut] , Kai Gu [aut] , Yin Li [aut] , Fei Zhao [aut]
Documentation: PDF Manual
MIT + file LICENSE license
Imports dplyr, ezcox, forcats, ggplot2, ggpubr, magrittr, ppcor, psych, purrr, shiny, stats, stringr, tibble, tidyr, UCSCXenaTools, utils
Suggests covr, cowplot, DT, furrr, future, ggrepel, ggstatsplot, knitr, pacman, plotly, plyr, RColorBrewer, rmarkdown, scales, survival, survminer, testthat
See at CRAN