A Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses

A novel, multi-modal simulation engine for studying dynamic cellular processes at single-cell resolution. 'dyngen' is more flexible than current single-cell simulation engines. It allows better method development and benchmarking, thereby stimulating development and testing of novel computational methods. Cannoodt et al. (2020) .


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install.packages("dyngen")

0.4.0 by Robrecht Cannoodt, 3 months ago


https://github.com/dynverse/dyngen


Report a bug at https://github.com/dynverse/dyngen/issues


Browse source code at https://github.com/cran/dyngen


Authors: Robrecht Cannoodt [aut, cre, cph] , Wouter Saelens [aut]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports assertthat, dplyr, dynutils, furrr, ggplot2, ggraph, ggrepel, GillespieSSA2, grDevices, grid, igraph, lmds, Matrix, methods, patchwork, pbapply, purrr, rlang, stats, tibble, tidygraph, tidyr, utils, viridis

Suggests covr, dynwrap, knitr, R.rsp, rmarkdown, testthat


See at CRAN