Fast Principal Component Analysis for Outlier Detection

Methods to detect genetic markers involved in biological adaptation. 'pcadapt' provides statistical tools for outlier detection based on Principal Component Analysis. Implements the method described in (Luu, 2016) .


Reference manual

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3.0.4 by Keurcien Luu, a year ago

Browse source code at

Authors: Keurcien Luu [aut, cre], Michael Blum [aut], Nicolas Duforet-Frebourg [ctb]

Documentation:   PDF Manual  

GPL (>= 2) license

Depends on robust, MASS, ggplot2, vcfR

Suggests knitr, qvalue, rmarkdown

See at CRAN