Fast Principal Component Analysis for Outlier Detection

Methods to detect genetic markers involved in biological adaptation. 'pcadapt' provides statistical tools for outlier detection based on Principal Component Analysis. Implements the method described in (Luu, 2016) .


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install.packages("pcadapt")

3.0.4 by Keurcien Luu, 3 months ago


Browse source code at https://github.com/cran/pcadapt


Authors: Keurcien Luu [aut, cre], Michael Blum [aut], Nicolas Duforet-Frebourg [ctb]


Documentation:   PDF Manual  


GPL (>= 2) license


Depends on robust, MASS, ggplot2, vcfR

Suggests knitr, qvalue, rmarkdown


See at CRAN