Small Helpers and Tricks for Epidemics Analysis

A collection of small functions useful for epidemics analysis and infectious disease modelling. This includes computation of basic reproduction numbers from growth rates, generation of hashed labels to anonymize data, and fitting discretized Gamma distributions.


Reference manual

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install.packages("epitrix")

0.4.1 by Thibaut Jombart, a year ago


http://www.repidemicsconsortium.org/epitrix/


Report a bug at https://github.com/reconhub/epitrix/issues


Browse source code at https://github.com/cran/epitrix


Authors: Thibaut Jombart [aut, cre] , Anne Cori [aut] , Zhian N. Kamvar [ctb] , Dirk Schumacher [ctb] , Flavio Finger [aut] , Charlie Whittaker [ctb]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports sodium, distcrete, stringi, dplyr, purrr, rlang, tidyr

Suggests testthat, roxygen2, outbreaks, incidence, knitr, rmarkdown, magrittr, ggplot2, tibble, covr


Imported by earlyR.


See at CRAN