Stock Assessment Methods Toolkit

Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform data-rich fisheries. 'SAMtool' provides a conditioning model, assessment models of varying complexity with standardized reporting, model-based management procedures, and diagnostic tools for evaluating assessments inside closed-loop simulation.


Reference manual

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1.2.5 by Quang Huynh, 12 days ago,

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Authors: Quang Huynh [aut, cre] , Tom Carruthers [aut] , Adrian Hordyk [aut]

Documentation:   PDF Manual  

GPL-3 license

Imports TMB, corpcor, dplyr, gplots, graphics, methods, rmarkdown, snowfall, stats, utils, vars

Depends on MSEtool

Suggests abind, caret, covr, ggplot2, knitr, mvtnorm, numDeriv, reshape2, shiny, testthat

Linking to TMB, RcppEigen

Depended on by openMSE.

See at CRAN