Stock Assessment Methods Toolkit

Simulation tools for closed-loop simulation are provided for the 'MSEtool' operating model to inform data-rich fisheries. 'SAMtool' provides a conditioning model, assessment models of varying complexity with standardized reporting, model-based management procedures, and diagnostic tools for evaluating assessments inside closed-loop simulation.


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Reference manual

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install.packages("SAMtool")

1.1.1 by Quang Huynh, 16 days ago


https://github.com/Blue-Matter/SAMtool


Report a bug at https://github.com/Blue-Matter/SAMtool/issues


Browse source code at https://github.com/cran/SAMtool


Authors: Quang Huynh [aut, cre] , Tom Carruthers [aut] , Adrian Hordyk [aut]


Documentation:   PDF Manual  


GPL-3 license


Imports TMB, corpcor, dplyr, gplots, graphics, methods, rmarkdown, snowfall, stats, utils

Depends on MSEtool

Suggests caret, covr, ggplot2, knitr, mvtnorm, numDeriv, reshape2, shiny, testthat

Linking to TMB, RcppEigen


Depended on by openMSE.


See at CRAN