Exploratory Graphics for Pharmacometrics

Supports a structured approach for exploring PKPD data < https://opensource.nibr.com/xgx/>. It also contains helper functions for enabling the modeler to follow best R practices (by appending the program name, figure name location, and draft status to each plot). In addition, it enables the modeler to follow best graphical practices (by providing a theme that reduces chart ink, and by providing time-scale, log-scale, and reverse-log-transform-scale functions for more readable axes). Finally, it provides some data checking and summarizing functions for rapidly exploring pharmacokinetics and pharmacodynamics (PKPD) datasets.


xgxr - Exploratory Graphics R Package - README

R-CMD-check license: MIT

The xgxr package supports a structured approach for exploring PKPD data, which is used by xGx website. The package contains helper functions for enabling the modeler to follow best R practices (by appending the program name, figure name location, and draft status to each plot) and the package enables the modeler to follow best graphical practices (by providing an xgx theme that reduces chart ink, and by providing time-scale, log-scale, and reverse-log-transform-scale functions for more readable axes). Finally, the package provides some data checking and summarizing functions for rapidly exploring a PKPD dataset.

Detailed documentation of xgxr is available here

The xgxr package is also available on CRAN.

A cheatsheet for the xGx website and xgxr package is available here

If you're interested in contributing to this package, we follow the tidyverse style guide.

Reference manual

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install.packages("xgxr")

1.1.6 by Andrew Stein, 2 months ago


https://opensource.nibr.com/xgx/


Report a bug at https://github.com/Novartis/xgxr/issues


Browse source code at https://github.com/cran/xgxr


Authors: Andrew Stein [aut, cre] , Alison Margolskee [aut] , Fariba Khanshan [aut] , Konstantin Krismer [aut] (ORCID: , Matthew Fidler [ctb] , Novartis Pharma AG [cph, fnd]


Documentation:   PDF Manual  


MIT + file LICENSE license


Imports assertthat, binom, Deriv, DescTools, dplyr, ggplot2, glue, graphics, grDevices, gtable, Hmisc, labeling, magrittr, minpack.lm, pander, png, RCurl, readr, scales, stats, stringr, tibble, utils, vctrs

Suggests caTools, gridExtra, knitr, pkgdown, rmarkdown, testthat, tidyr


Imported by edar, nlmixr2plot.

Suggested by BayesERtools, ggPMX, monolix2rx, nlmixr2est, nonmem2rx, rxode2.


See at CRAN