Scrubbing and Other Data Cleaning Routines for fMRI

Data-driven fMRI denoising with projection scrubbing (Pham et al (2021) ). Also includes routines for DVARS (Derivatives VARianceS) (Afyouni and Nichols (2018) ), motion scrubbing (Power et al (2012) ), aCompCor (anatomical Components Correction) (Muschelli et al (2014) ), detrending, and nuisance regression. Projection scrubbing and DVARS are also applicable to other outlier detection tasks involving high-dimensional data.


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Reference manual

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install.packages("fMRIscrub")

0.8.6 by Amanda Mejia, a month ago


https://github.com/mandymejia/fMRIscrub


Report a bug at https://github.com/mandymejia/fMRIscrub/issues


Browse source code at https://github.com/cran/fMRIscrub


Authors: Amanda Mejia [aut, cre] , John Muschelli [aut] , Damon Pham [aut] , Daniel McDonald [ctb]


Documentation:   PDF Manual  


GPL-3 license


Imports MASS, e1071, pesel, robustbase, stats, utils, Rcpp

Suggests corpcor, cowplot, ciftiTools, knitr, rmarkdown, RNifti, ggplot2, ggpubr, ica, neurobase, oro.nifti, gridExtra, testthat, covr

Linking to Rcpp, RcppArmadillo


See at CRAN