Digital PCR Analysis

Analysis, visualisation and simulation of digital polymerase chain reaction (dPCR) (Burdukiewicz et al. (2016) ). Supports data formats of commercial systems (Bio-Rad QX100 and QX200; Fluidigm BioMark) and other systems.

CRAN_Status_Badge Downloads Build Status Analysis, visualisation and simulation of digital PCR experiments.

dpcR is available on CRAN, so installation is as simple as:


You can install the latest development version of the code using the devtools R package.

# Install devtools, if you haven't already.

dpcReport - web server and standalone GUI

Our web server dpcReport allows analysis of dPCR data without installing the package. It may be also downloaded as a standalone application (does not require prior installation of R) from SourceForge.


Reference manual

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0.5 by Michal Burdukiewicz, a year ago

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Browse source code at

Authors: Michal Burdukiewicz [cre, aut] , Stefan Roediger [aut] , Bart Jacobs [aut] , Piotr Sobczyk [ctb] , Andrej-Nikolai Spiess [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports binom, chipPCR, e1071, evd, dgof, multcomp, qpcR, pracma, rateratio.test, readxl, signal, shiny, spatstat

Depends on methods

Suggests digest, DT, ggplot2, knitr, markdown, rhandsontable, rmarkdown, shinythemes, xtable

See at CRAN