Serology-Based Data Analysis and Visualization

Data wrangling and cleaning, quality control checks and implementation of machine learning classification algorithm.

SeroTrackR

The {SeroTrackR} R package compliments the PvSeroApp see Github here for experienced users who are comfortable with implementing the code in their own R sessions.

This package contains helper functions relevant for Plasmodium spp. projects for in-house and collaborator needs.

How to install the package:

devtools::install_github("dionnecargy/SeroTrackR") # To download the package
library(SeroTrackR) # To load the package 

How can I use the package?

Please see the tutorial or see the vignettes inside the package by running the following commands:

browseVignettes("SeroTrackR") 

# To run a specific vignette: 
vignette("PvSeroApp_R_Tutorial")
vignette("Pk_Pv_Pf_Serology_Tutorial")