Application of 'RaceID' allows inference of cell types and prediction of lineage trees by he StemID2 algorithm. Herman, J.S., Sagar, Grün D. (2018) .
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0.2.3 by Dominic Grün, 10 months ago
Browse source code at https://github.com/cran/RaceID
Authors: Dominic Grün <[email protected]>
Documentation: PDF Manual
GPL-3 license
Imports coop, compiler, cluster, FateID, FNN, fpc, ggplot2, grDevices, ica, igraph, irlba, locfit, methods, MASS, Matrix, matrixStats, parallel, pheatmap, propr, quadprog, randomForest, Rcpp, RColorBrewer, Rtsne, umap, vegan
Suggests batchelor, DESeq2, knitr, rmarkdown, SummarizedExperiment
Linking to Rcpp
See at CRAN