Application of 'RaceID' allows inference of cell types and prediction of lineage trees by he StemID2 algorithm. Herman, J.S., Sagar, Grün D. (2018) .
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Dominic Grün, 6 months ago
Browse source code at
Dominic Grün <[email protected]>
Imports coop, compiler, cluster, FateID, FNN, fpc, ggplot2, grDevices, ica, igraph, irlba, locfit, methods, MASS, Matrix, matrixStats, parallel, pheatmap, propr, quadprog, randomForest, Rcpp, RColorBrewer, Rtsne, umap, vegan
Suggests batchelor, DESeq2, knitr, rmarkdown, SummarizedExperiment
Linking to Rcpp
See at CRAN