Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data

Functions for processing, analysis and visualization of Hydrogen Deuterium eXchange monitored by Mass Spectrometry experiments (HDX-MS). 'HaDeX' introduces a new standardized and reproducible workflow for the analysis of the HDX-MS data, including novel uncertainty intervals. Additionally, it covers data exploration, quality control and generation of publication-quality figures. All functionalities are also available in the in-built 'Shiny' app.


Reference manual

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1.2.1 by Weronika Puchala, a year ago

Browse source code at

Authors: Weronika Puchala [cre, aut] , Michal Burdukiewicz [aut] , Dominik Rafacz [ctb]

Documentation:   PDF Manual  

GPL-3 license

Imports data.table, dplyr, DT, ggplot2, gsubfn, latex2exp, reshape2, readr, readxl, shiny, stringr, tidyr

Suggests spelling, covr, digest, knitr, pander, renv, rmarkdown, shinycssloaders, shinyhelper, shinyjs, testthat, vdiffr

See at CRAN