robis
Ocean Biodiversity Information System (OBIS) Client
Client for the Ocean Biodiversity Information System (< https://obis.org>).
R client for the OBIS API
Installation
# CRANinstall.packages("robis") # latest development versioninstall.packages("devtools")devtools::install_github("iobis/robis")Occurrence
Get occurrences by scientific name:
records <- occurrence("Abra alba")Get occurrences by AphiaID:
records <- occurrence(taxonid = 141433)Get occurrences by geometry:
records <- occurrence("Abra alba", geometry = "POLYGON ((2.59689 51.16772, 2.62436 51.14059, 2.76066 51.19225, 2.73216 51.20946, 2.59689 51.16772))")Plot occurrences on a Leaflet or ggplot2 map:
map_leaflet(records)map_ggplot(records)Checklist
Get a checklist for a taxonomic group:
taxa <- checklist("Semelidae")Get a checklist for a region:
taxa <- checklist(geometry = "POLYGON ((2.59689 51.16772, 2.62436 51.14059, 2.76066 51.19225, 2.73216 51.20946, 2.59689 51.16772))")News
robis 2.1.0
Added dataset(), area(), and node().
robis 2.0.0
This is a major release which links robis to the new OBIS data system released in January 2019.