'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects

Base package for 'Neuroconductor', which includes many helper functions that interact with objects of class 'nifti', implemented by package 'oro.nifti', for reading/writing and also other manipulation functions.

The goal of neurobase is to add functionality to oro.nifti and it is the baseline package for Neuroconductor.

BuildStatus CRAN_Status_Badge AppVeyor BuildStatus CoverageStatus


You can install neurobase from github with:

# install.packages("devtools")


neurobase 1.27.4

  • Added a NEWS.md file to track changes to the package.
  • Fixed rescale_img.
  • Added arguments to robust_window for only non-zero values for quantile.
  • Function finite_img for array works.
  • Only useRaster if is.null(y) in ortho2.

Reference manual

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1.32.1 by John Muschelli, 9 months ago

Report a bug at https://github.com/muschellij2/neurobase/issues

Browse source code at https://github.com/cran/neurobase

Authors: John Muschelli [aut, cre]

Documentation:   PDF Manual  

GPL-2 license

Imports methods, abind, matrixStats, R.utils, graphics, grDevices, stats, RNifti

Depends on oro.nifti

Suggests testthat, ggplot2, knitr, rmarkdown, dplyr, reshape2, httr, covr, brainR

Imported by WhiteStripe, freesurfer, neuronorm, papayar, spm12r.

Depended on by fslr.

Suggested by fMRIscrub.

See at CRAN