Wrapper Functions for 'Freesurfer'

Wrapper functions that interface with 'Freesurfer' < https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.


freesurfer 1.6.0

  • Released to CRAN after major changes to the package.

  • Added a NEWS.md file to track changes to the package.

Reference manual

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1.6.1 by John Muschelli, 5 months ago

Report a bug at https://github.com/muschellij2/freesurfer/issues

Browse source code at https://github.com/cran/freesurfer

Authors: John Muschelli <[email protected]>

Documentation:   PDF Manual  

GPL-3 license

Imports methods, neurobase, tools, R.utils, reshape2

Suggests magrittr, knitr, oro.nifti, rgl, rmarkdown, pander, fslr

System requirements: Freesurfer (https://surfer.nmr.mgh.harvard.edu/)

See at CRAN