Wrapper Functions for 'Freesurfer'

Wrapper functions that interface with 'Freesurfer' (https:// surfer.nmr.mgh.harvard.edu/), a powerful and commonly-used 'neuroimaging' software, using system commands. The goal is to be able to interface with 'Freesurfer' completely in R, where you pass R objects of class 'nifti', implemented by package 'oro.nifti', and the function executes an 'Freesurfer' command and returns an R object of class 'nifti' or necessary output.


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Reference manual

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install.packages("freesurfer")

1.0 by John Muschelli, 9 months ago


Report a bug at https://github.com/muschellij2/freesurfer/issues


Browse source code at https://github.com/cran/freesurfer


Authors: John Muschelli <muschellij2@gmail.com>


Documentation:   PDF Manual  


GPL-3 license


Imports methods, neurobase, tools, R.utils, reshape2

Suggests magrittr, oro.nifti, knitr, rmarkdown

System requirements: Freesurfer (https://surfer.nmr.mgh.harvard.edu/)


See at CRAN