Deconvolution, Alignment and Model Fitting of 1d NMR Spectra

An integrated framework for deconvolution, alignment and postprocessing of 1-dimensional (1d) nuclear magnetic resonance (NMR) spectra, extended with end-to-end model fitting that turns the resulting matrix of aligned signal integrals into classification models. The deconvolution part uses the algorithm described in Koh et al. (2009) . The alignment part is based on functions from the 'speaq' package, described in Beirnaert et al. (2018) and Vu et al. (2011) . A detailed description and evaluation of an early version of the package can be found in Haeckl et al. (2021) . 'metabodeconplus' is the actively developed successor to the 'metabodecon' package and introduces backwards-incompatible API changes.


Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("metabodeconplus")

0.22.0 by Tobias Schmidt, 2 months ago


https://github.com/spang-lab/metabodeconplus/, https://spang-lab.github.io/metabodeconplus/


Report a bug at https://github.com/spang-lab/metabodeconplus/issues


Browse source code at https://github.com/cran/metabodeconplus


Authors: Tobias Schmidt [aut, cre, cph] , Martina Haeckl [aut, cph] , Yanren Linda Hu [ctb] , Wolfram Gronwald [aut, cph]


Documentation:   PDF Manual  


GPL (>= 3) license


Imports mathjaxr, ranger, readJDX, toscutil, withr

Suggests BiocManager, cachem, covr, devtools, diffobj, digest, doParallel, e1071, glmnet, glue, impute, inline, knitr, lifecycle, MassSpecWavelet, mdrb, microbenchmark, multtest, pkgbuild, pkgload, pROC, R.devices, rcmdcheck, remotes, rlang, rmarkdown, rpart, speaq, styler, testthat, usethis, V8, vdiffr, waldo


See at CRAN