Amino Acid Substitution Effect Analyser

Given a protein multiple sequence alignment, it is daunting task to assess the effects of substitutions along sequence length. 'aaSEA' package is intended to help researchers to rapidly analyse property changes caused by single, multiple and correlated amino acid substitutions in proteins. Methods for identification of co-evolving positions from multiple sequence alignment are as described in : Pelé et al., (2017) .


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install.packages("aaSEA")

1.0.0 by Raja Sekhara Reddy D.M, 23 days ago


Browse source code at https://github.com/cran/aaSEA


Authors: Raja Sekhara Reddy D.M


Documentation:   PDF Manual  


GPL-3 license


Imports DT, networkD3, shiny, shinydashboard, magrittr, Bios2cor, seqinr, plotly, Hmisc

Suggests knitr, rmarkdown


See at CRAN