A Collection of Efficient and Extremely Fast R Functions

A collection of fast (utility) functions for data analysis. Column and row wise means, medians, variances, minimums, maximums, many t, F and G-square tests, many regressions (normal, logistic, Poisson), are some of the many fast functions. References: a) Tsagris M., Papadakis M. (2018). Taking R to its limits: 70+ tips. PeerJ Preprints 6:e26605v1 . b) Tsagris M. and Papadakis M. (2018). Forward regression in R: from the extreme slow to the extreme fast. Journal of Data Science, 16(4): 771--780. . c) Chatzipantsiou C., Dimitriadis M., Papadakis M. and Tsagris M. (2020). Extremely Efficient Permutation and Bootstrap Hypothesis Tests Using Hypothesis Tests Using R. Journal of Modern Applied Statistical Methods, 18(2), eP2898. . d) Tsagris M., Papadakis M., Alenazi A. and Alzeley O. (2024). Computationally Efficient Outlier Detection for High-Dimensional Data Using the MDP Algorithm. Computation, 12(9): 185. . e) Tsagris M. and Papadakis M. (2025). Fast and light-weight energy statistics using the R package Rfast. .


Rfast

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1. About

A collection of fast (utility) functions for data analysis. Column- and row- wise means, medians, variances, minimums, maximums, many t, F and G-square tests, many regressions (normal, logistic, Poisson), are some of the many fast functions.

2. References

  • Tsagris M., Papadakis M. (2018). Taking R to its limits: 70+ tips. PeerJ Preprints 6:e26605v1 <\doi:10.7287/peerj.preprints.26605v1>.
  • Tsagris M. and Papadakis M. (2018). Forward regression in R: from the extreme slow to the extreme fast. Journal of Data Science, 16(4): 771–780. <\doi:10.6339/JDS.201810_16(4).00006>.

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Reference manual

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install.packages("Rfast")

2.1.5.2 by Manos Papadakis, a year ago


https://github.com/RfastOfficial/Rfast


Report a bug at https://github.com/RfastOfficial/Rfast/issues


Browse source code at https://github.com/cran/Rfast


Authors: Manos Papadakis [aut, cre, cph] , Michail Tsagris [aut] , Marios Dimitriadis [aut] , Stefanos Fafalios [aut] , Matteo Fasiolo [aut] , Morgan Jacob [ctb] , Giorgos Borboudakis [aut] , John Burkardt [aut] , Changliang Zou [aut]


Documentation:   PDF Manual  


GPL (>= 2.0) license


Depends on Rcpp, zigg, RcppParallel

Suggests philentropy

Linking to Rcpp, RcppArmadillo, RcppParallel, zigg

System requirements: C++17


Imported by ActiveLearning4SPM, BBC, BMIselect, CCd, CKNNRLD, CPC, Compositional, CompositionalClust, CompositionalHDDA, CompositionalML, CompositionalMPT, CompositionalNAimp, CompositionalRF, CompositionalSR, CompositionalZADR, Compositionalasmr, Compositionalcln, Compositionalscsmr, Compositionalzerocens, CptNonPar, Cronbach, CrossExpression, DER, Directional, DrDimont, FCtools, FishDiveR, IMIFA, INCVCommunityDetection, LePage, MLE, MN, MXM, MetSizeR, Mobius, NGBVS, NeEDS4BigData, NetSci, OPI, OnlineSurr, PNAR, QUALYPSO, RAINBOWR, RDM, RHclust, RankAggSIgFUR, Rfast2, Rtropical, SMOTEWB, SelectBoost, SelectSim, SmoothWin, Spectrum, SteppedPower, TML, TSCI, VoxR, WRI, bivpois, cauchypca, cauchyreg, circda, clusterMI, clusterindices, colocboost, cols, consrq, corrfuns, cpmr, dCovTS, dcorVS, decorrelate, deepMOU, dyads, epilogi, estats, fChange, fastFMM, fastbioclim, fitlandr, foldedt, frscore, fsn, funcharts, fuzzylink, gMOIP, glmtoolbox, gomp, gp, handwriter, highd2means, imbalanceDatRel, irtQ, kDGLM, kernda, kernreg, lmap, manydist, mbr, meow, metaGE, metaplus, mfpp, micd, mixgb, mixpoissonreg, multiRec, mvcauchy, mvcor, mvhtests, mziln, nda, nebula, nestedcv, nlgm, nnmf, nnsolve, obfuscatoR, outliersHD, pchc, pdcor, phylotypr, phylter, plssem, ppks, ppsbm, randomLCA, rcccd, rdcor, regda, robqda, rvMF, scoredec, scpropreg, sdlrm, sensobol, shinyExprPortal, simDAG, skedastic, smartsnp, smrlasso, spanner, sparseCov, speaq, sphereclust, svmf, tame, tetragon, thamesmix, truh, tvcure, twl, univariateML, vimixr, volcano3D, wTO.

Depended on by CICA, datanugget, dcortools, mrfse, success.

Suggested by CimpleG, FRESA.CAD, MVNBayesian, SigBridgeRUtils, TPXG, binomCI, corbouli, fertilmodel, geppe, irls, lightAUC, mlrCPO, plattice, poobly, sgsR, susieR.


See at CRAN