Feature Set Enrichment Analysis for Metabolomics and Transcriptomics

Methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis.


News

28.3.2018

Since creating a dynamic vignette was becoming more and more problematic with the growing examples, I have moved most of its contents to the "tmod User Guide", which can be displayed using the command tmodUserGuide().

Reference manual

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install.packages("tmod")

0.40 by January Weiner, 10 months ago


http://bioinfo.mpiib-berlin.mpg.de/tmod/


Browse source code at https://github.com/cran/tmod


Authors: January Weiner


Documentation:   PDF Manual  


GPL (>= 2.0) license


Imports beeswarm, tagcloud, XML, methods, plotwidgets

Suggests testthat, knitr, rmarkdown, pca3d, limma


Imported by disco.


See at CRAN