Genetic Analysis of Multi-Parent Recombinant Inbred Lines

Constructing linkage maps, reconstructing haplotypes, estimating linkage disequilibrium and quantitative trait loci (QTL) mapping in multi-parent RIL designs (e.g. MAGIC).


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install.packages("mpMap2")

1.0.1 by Rohan Shah, a month ago


Browse source code at https://github.com/cran/mpMap2


Authors: Rohan Shah [aut, cre] , Emma Huang [aut] , Matthew Morell [ctb] , Alex Whan [ctb] , Colin Cavanagh [ctb]


Documentation:   PDF Manual  


GPL-2 license


Imports ggplot2, Matrix, methods, qtl, igraph, fastcluster, pryr, nnls, RColorBrewer, jsonlite, progress, stats, sn, car

Suggests testthat, knitr, rmarkdown, gridExtra, Heatplus

Linking to Rcpp

System requirements: C++11


See at CRAN