Lightweight Graph Based Multiple Comparison Procedures

A lightweight fork of 'gMCP' with functions for graphical described multiple test procedures introduced in Bretz et al. (2009) and Bretz et al. (2011) . Implements a flexible function using 'ggplot2' to create multiplicity graph visualizations. Contains instructions of multiplicity graph and graphical testing for group sequential design, described in Maurer and Bretz (2013) , with necessary unit testing using 'testthat'.


gMCPLite

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gMCPLite is a fork of gMCP for graph-based multiple comparison procedures, with the following features:

  • Kept a selected subset of the original functions.
  • Removed the rJava dependency and the Java-based graphical interface.
  • Added an hGraph() function for ggplot2 visualizations. It bridges gMCP result objects and gsDesign to produce multiple comparison graphs and sequential graph updates.

A Shiny app is also available to generate graphs of multiple comparisons and update graphs based on graphical approach.

Installation

# The easiest way to get gMCPLite is to install:
install.packages("gMCPLite")

# Alternatively, install development version from GitHub:
# install.packages("remotes")
remotes::install_github("Merck/gMCPLite")

Reference manual

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install.packages("gMCPLite")

0.1.7 by Keaven Anderson, 8 months ago


https://merck.github.io/gMCPLite/, https://github.com/Merck/gMCPLite


Report a bug at https://github.com/Merck/gMCPLite/issues


Browse source code at https://github.com/cran/gMCPLite


Authors: Yalin Zhu [aut] , Yilong Zhang [aut] , Xuan Deng [aut] , Keaven Anderson [aut, cre] , Nan Xiao [aut] , Kornelius Rohmeyer [ctb] (gMCP author) , Florian Klinglmueller [ctb] (gMCP author) , gMCP project contributors [cph] (gMCP package) , Merck & Co. , Inc. , Rahway , NJ , USA and its affiliates [cph]


Documentation:   PDF Manual  


GPL-3 license


Imports ggplot2, graphics, grDevices, grid, MASS, methods, mvtnorm, stats, utils

Suggests covr, dplyr, gridExtra, gsDesign, gt, kableExtra, knitr, multcomp, ragg, rmarkdown, scales, testthat, tibble, vdiffr


Imported by TrialSimulator.

Suggested by multigrain.


See at CRAN