Core Functions to Read and Fit 13c Time Series from Breath Tests

Reads several formats of 13C data (IRIS/Wagner, BreathID) and CSV. Creates artificial sample data for testing. Fits Maes/Ghoos, Bluck-Coward self-correcting formula using 'nls', 'nlme'. Methods to fit breath test curves with Bayesian Stan methods are refactored to package 'breathteststan'. For a Shiny GUI, see package 'dmenne/breathtestshiny' on github.

Reference manual

install.packages("breathtestcore")

0.8.11 by Dieter Menne, 3 months ago

https://github.com/dmenne/breathtestcore,

Report a bug at https://github.com/dmenne/breathtestcore/issues

Browse source code at https://github.com/cran/breathtestcore

Authors: Dieter Menne [aut, cre] , Menne Biomed Consulting Tuebingen [cph] , Benjamin Misselwitz [fnd] , Mark Fox [fnd] , Andreas Steingoetter [dtc] , University Hospital of Zurich , Dep. Gastroenterology [fnd, dtc]

Documentation: PDF Manual

GPL-3 license

Imports assertthat, dplyr, ggfittext, ggplot2, broom, graphics, grid, MASS, methods, multcomp, nlme, purrr, readr, readxl, signal, stats, stringr, tibble, tidyr, tools, utils, xml2

Suggests base, gridExtra, qpdf, knitr, rmarkdown, testthat, breathteststan, covr

System requirements: pandoc

Imported by breathteststan.

See at CRAN

breathtestcore

Core Functions to Read and Fit 13c Time Series from Breath Tests

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