A collection of 'shiny' applications for the R package 'Luminescence'. These mainly, but not exclusively, include applications for plotting chronometric data from e.g. luminescence or radiocarbon dating. It further provides access to bootstraps tooltip and popover functionality and contains the 'jscolor.js' library with a custom 'shiny' output binding.
PREVIEW: New application that scales the gamma dose rate considering layer-to-layer
variations in soil radioactivity. Base function:
NOTE: This application will only start if the development version 0.9.x of the
Luminescence is installed as the function
still under development.
New application to support the new R package
RCarb. Base function
Removed and updated deprecated links from the "About"-tab in all applications.
New application that compares the OSL/IRSL stimulation power of measurements
performed on Freiberg Instruments lexsyg devices to check the stability
of the stimulation power (Contributed by Sebastian Kreutzer).
New application to calculate the fast ratio of CW-OSL curves after Durcan
and Duller (2011). Base function:
New application to estimate the g-value from a table of Lx/Tx values with
corresponding waiting times since irradiation and to apply a fading
after Huntley & Lamothe (2001).
New application to fit eq. 1 of Sohbati et al. (2012a) or eq. 12 of
Sohbati et al. (2012b) to OSL surface exposure data.
Output panel showing the R code to reproduce the plot/calculation is now properly responsive and updates as soon as input widgets change.
Internal: server logic of most applications simplified.
Several minor bugfixes.
Major overhaul of the data input panel for most applications. Uploaded text files are now imported via 'data.table::fread()', which automatically detects the delimiter and potential headers. Hence, all widgets related to data import are no longer required and were removed (#14).
The input data can now be directly manipulated in the newly added spreadsheet(s) in the data input panels. The spreadsheets also allow copy and pasting of data, so uploading a file is no longer the only way to provide user data (#12).
New Dashboard addin added. The dashboard provides access to all available applications in the package and can be accessed either (i) through the addin dropdown menu in the RStudio IDE or (ii) by running 'app_RLum()' without any keyword.
Implemented newest shiny feature (v0.14) to bookmark the current app state. All apps now include a bookmark button, which returns a URL query string that can be used to restore the app's state at any later time.
New application to plot filter combinations along with the optional
net transmission. Base function:
app_RLum(): 'filter'. External contribution by Urs Tilmann
Wolpert (Justus-Liebig-University Giessen) and Sebastian Kreutzer
(Universite Bordeaux Montaigne).
New package dependencies: 'shinydashboard', 'rhandsontable', 'data.table', 'readxl'
Internal: R dcoumentation re-written in Markdown using 'roxygen2 >=6.0.0'
Several minor bugfixes.
New application to transform CW OSL curves (keyword 'transformCW') using the functions 'CW2pHMi', 'CW2pLM', 'CW2pLMi' and 'CW2pPMi' of the R package 'Luminescence'.
Removed UI elements that used now deprecated function arguments.
Added new UI elements for arguments added to functions after version 0.4.2 of the 'Luminescence' package.
Removed the database feature in the abanico plot application.
Removed dependencies on 'digest' and 'RCurl'.
Removed all 'Exit' buttons.
Code output to reproduce the plots is now generated dynamically and should be more reliable.
R Luminescence Package Team now properly mentioned as contributors.
Fixed many typos.